mrps31 mitochondrial ribosomal protein S31 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: mrps31provided by ZNC
Official Full Name: mitochondrial ribosomal protein S31provided by ZNC
Primary source: ZFIN:ZDB-GENE-030131-3715
See related: Ensembl:ENSDARG00000057855 AllianceGenome:ZFIN:ZDB-GENE-030131-3715
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: D60; fb63a02; fc50g12; wu:fb63a02; wu:fc50g12; si:ch211-114c12.1
Summary: Predicted to be a structural constituent of ribosome. Predicted to be located in mitochondrion and ribosome. Predicted to be part of mitochondrial small ribosomal subunit. Orthologous to human MRPS31 (mitochondrial ribosomal protein S31). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 5

Exon count:: 7

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	5	NC_007116.7 (24138778..24154000, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	5	NC_007116.6 (23634978..23650200, complement)

Chromosome 5 - NC_007116.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

fc50g12 (e-PCR)
- UniSTS:189275

fb63a02 (e-PCR)
- UniSTS:189032

Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables structural constituent of ribosome	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
part_of mitochondrial small ribosomal subunit	IEA Inferred from Electronic Annotation more info
located_in mitochondrion	IEA Inferred from Electronic Annotation more info
part_of ribonucleoprotein complex	IEA Inferred from Electronic Annotation more info
located_in ribosome	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: small ribosomal subunit protein mS31

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001128328.1 → NP_001121800.1 small ribosomal subunit protein mS31

Status: PROVISIONAL

Source sequence(s)

AL928875, BX119902

UniProtKB/TrEMBL

A0A8M1NHU1, A2BEP0

Related

ENSDARP00000075056.2, ENSDART00000080609.3

Conserved Domains (1) summary

pfam15433
Location:130 → 424

MRP-S31; Mitochondrial 28S ribosomal protein S31