cxl34b.11 CX chemokine ligand 34b, duplicate 11 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: cxl34b.11provided by ZNC
Official Full Name: CX chemokine ligand 34b, duplicate 11provided by ZNC
Primary source: ZFIN:ZDB-GENE-091204-33
See related: Ensembl:ENSDARG00000092283 AllianceGenome:ZFIN:ZDB-GENE-091204-33
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: cxl1; si:dkey-25o1.2
Summary: Enables chemokine activity. Acts upstream of or within cell chemotaxis and signal transduction. Predicted to be located in extracellular space. [provided by Alliance of Genome Resources, Jan 2025]
Orthologs: all
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Genomic context

Location:: chromosome: 24

Exon count:: 5

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	24	NC_007135.7 (27470279..27473705, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	24	NC_007135.6 (27391120..27394546, complement)

Chromosome 24 - NC_007135.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables chemokine activity	IDA Inferred from Direct Assay more info	PubMed
enables chemokine activity	IEA Inferred from Electronic Annotation more info
enables cytokine activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within cell chemotaxis	IDA Inferred from Direct Assay more info	PubMed
acts_upstream_of_or_within immune response	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within signal transduction	IDA Inferred from Direct Assay more info	PubMed

Component	Evidence Code	Pubs
located_in extracellular region	IEA Inferred from Electronic Annotation more info
located_in extracellular space	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: CX chemokine ligand 34b, duplicate 11

Names: CXL chemokine 1; CXL-chr24a; CXL34bk; chemokine CXL-C24a

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001115062.1 → NP_001108534.1 CX chemokine ligand 34b, duplicate 11 precursor

See identical proteins and their annotated locations for NP_001108534.1

Status: PROVISIONAL

Source sequence(s)

AB331756

UniProtKB/TrEMBL

A9ZPE1, F1Q6N2

Related

ENSDARP00000115786.1, ENSDART00000139874.2

Conserved Domains (1) summary

cl00134
Location:49 → 96

Chemokine; Chemokine: small cytokines, including a number of secreted growth factors and interferons involved in mitogenic, chemotactic, and inflammatory activity; distinguished from other cytokines by their receptors, which are G-protein coupled receptors; divided ...