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    steep1 STING1 ER exit protein 1 [ Danio rerio (zebrafish) ]

    Gene ID: 447921, updated on 9-Dec-2024

    Summary

    Official Symbol
    steep1provided by ZNC
    Official Full Name
    STING1 ER exit protein 1provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-040912-104
    See related
    Ensembl:ENSDARG00000067981 AllianceGenome:ZFIN:ZDB-GENE-040912-104
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    STEEP; zgc:103697
    Summary
    Predicted to enable protein-macromolecule adaptor activity. Predicted to be involved in endoplasmic reticulum membrane organization; endoplasmic reticulum to Golgi vesicle-mediated transport; and protein exit from endoplasmic reticulum. Predicted to be located in cell body; cytoplasm; and nucleus. Human ortholog(s) of this gene implicated in non-syndromic X-linked intellectual disability 107. Orthologous to human STEEP1 (STING1 ER exit protein 1). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See steep1 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 5 NC_007116.7 (35955443..35967445)
    105 previous assembly GRCz10 (GCF_000002035.5) 5 NC_007116.6 (35355290..35367292)

    Chromosome 5 - NC_007116.7Genomic Context describing neighboring genes Neighboring gene StAR related lipid transfer domain containing 8 Neighboring gene relaxin family peptide receptor 2, like Neighboring gene uncharacterized LOC103911089 Neighboring gene ephrin-B1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables molecular_function  
    enables protein-macromolecule adaptor activity  
    Component Evidence Code Pubs
    located_in cell body  
    located_in cytoplasm  
    located_in cytoplasm  
    located_in nucleus  
    located_in nucleus  

    General protein information

    Preferred Names
    STING ER exit protein
    Names
    UPF0428 protein CXorf56 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001004659.1 → NP_001004659.1  STING ER exit protein

      See identical proteins and their annotated locations for NP_001004659.1

      Status: PROVISIONAL

      Source sequence(s)
      BC081515
      UniProtKB/Swiss-Prot
      Q66I61
      Related
      ENSDARP00000069117.3, ENSDART00000074630.5

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007116.7 Reference GRCz11 Primary Assembly

      Range
      35955443..35967445
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_068221156.1 → XP_068077257.1  STING ER exit protein isoform X1

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