U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    frrs1b ferric-chelate reductase 1b [ Danio rerio (zebrafish) ]

    Gene ID: 557898, updated on 9-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    frrs1bprovided by ZNC
    Official Full Name
    ferric-chelate reductase 1bprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-080917-44
    See related
    Ensembl:ENSDARG00000077605 AllianceGenome:ZFIN:ZDB-GENE-080917-44
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    im:7161139
    Summary
    Predicted to enable metal ion binding activity. Predicted to be located in membrane. Is expressed in blood; intermediate cell mass of mesoderm; and ventral mesoderm. Orthologous to human FRRS1 (ferric chelate reductase 1). [provided by Alliance of Genome Resources, Dec 2024]
    Annotation information
    Annotation category: partial on reference assembly
    Orthologs
    all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See frrs1b in Genome Data Viewer
    Location:
    chromosome: 24
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 24 NC_007135.7 (29907662..29931978)
    105 previous assembly GRCz10 (GCF_000002035.5) 24 NC_007135.6 (29902245..29926307)

    Chromosome 24 - NC_007135.7Genomic Context describing neighboring genes Neighboring gene amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase b Neighboring gene uncharacterized LOC137489257 Neighboring gene glycogen debranching enzyme-like Neighboring gene palmdelphin b Neighboring gene palmdelphin-like Neighboring gene uncharacterized LOC137489259

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Expression

    Go to the top of the page Help
    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Genome-wide analysis of the zebrafish Klf family identifies two genes important for erythroid maturation. Xue Y, et al. Dev Biol, 2015 Jul 15. PMID 26015096
    2. Gfi1aa and Gfi1b set the pace for primitive erythroblast differentiation from hemangioblasts in the zebrafish embryo. Moore C, et al. Blood Adv, 2018 Oct 23. PMID 30309860, Free PMC Article
    3. RFX transcription factors are essential for hearing in mice. Elkon R, et al. Nat Commun, 2015 Oct 15. PMID 26469318, Free PMC Article
    4. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article
    5. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    putative ferric-chelate reductase 1
    Names
    frrs1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007135.7 Reference GRCz11 Primary Assembly

      Range
      29907662..29931978
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017353998.3 → XP_017209487.1  putative ferric-chelate reductase 1

      UniProtKB/TrEMBL
      A0A8M6Z4V8
      Related
      ENSDARP00000130544.2, ENSDART00000168422.2
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials