zcchc9 zinc finger, CCHC domain containing 9 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: zcchc9provided by ZNC
Official Full Name: zinc finger, CCHC domain containing 9provided by ZNC
Primary source: ZFIN:ZDB-GENE-031030-9
See related: Ensembl:ENSDARG00000007531 AllianceGenome:ZFIN:ZDB-GENE-031030-9
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: zgc:56467
Summary: Predicted to enable nucleic acid binding activity and zinc ion binding activity. Predicted to be active in nucleolus. Orthologous to human ZCCHC9 (zinc finger CCHC-type containing 9). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 10

Exon count:: 6

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	10	NC_007121.7 (42898924..42903937)
105	previous assembly	GRCz10 (GCF_000002035.5)	10	NC_007121.6 (43070544..43075557)

Chromosome 10 - NC_007121.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables metal ion binding	IEA Inferred from Electronic Annotation more info
enables nucleic acid binding	IEA Inferred from Electronic Annotation more info
enables zinc ion binding	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
is_active_in cellular_component	ND No biological Data available more info
is_active_in nucleolus	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: zinc finger CCHC domain-containing protein 9

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_198370.1 → NP_938184.1 zinc finger CCHC domain-containing protein 9

See identical proteins and their annotated locations for NP_938184.1

Status: PROVISIONAL

Source sequence(s)

BC049028

UniProtKB/TrEMBL

Q7ZUI6

Related

ENSDARP00000003488.6, ENSDART00000015872.9

Conserved Domains (1) summary

PTZ00368
Location:117 → 215

PTZ00368; universal minicircle sequence binding protein (UMSBP); Provisional