tnfaip8l1 tumor necrosis factor, alpha-induced protein 8-like 1 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: tnfaip8l1provided by ZNC
Official Full Name: tumor necrosis factor, alpha-induced protein 8-like 1provided by ZNC
Primary source: ZFIN:ZDB-GENE-040426-695
See related: Ensembl:ENSDARG00000086457 AllianceGenome:ZFIN:ZDB-GENE-040426-695
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: TIPE1; tnfaip8; zgc:55331; si:dkey-49m19.6
Summary: Predicted to be involved in negative regulation of TOR signaling. Predicted to act upstream of or within regulation of apoptotic process. Predicted to be active in cytoplasm. Is expressed in otic vesicle; pectoral fin; pharyngeal arch; and pronephros. Orthologous to human TNFAIP8L1 (TNF alpha induced protein 8 like 1). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs: all
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Genomic context

Location:: chromosome: 22

Exon count:: 2

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	22	NC_007133.7 (5153461..5171362, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	22	NC_007133.6 (4769086..4786987, complement)

Chromosome 22 - NC_007133.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Structural insight into TIPE1 functioning as a lipid transfer protein.
Title: Structural insight into TIPE1 functioning as a lipid transfer protein.

Submit: New GeneRIF Correction

General gene information

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Markers

fd16d09.x1 (e-PCR)
- UniSTS:204211

fi13b11.x1 (e-PCR)
- UniSTS:196813

AI721791 (e-PCR)
- UniSTS:206049

Gene Ontology Provided by ZFIN

Process	Evidence Code	Pubs
involved_in negative regulation of TOR signaling	ISS Inferred from Sequence or Structural Similarity more info
acts_upstream_of_or_within regulation of apoptotic process	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
is_active_in cytoplasm	IBA Inferred from Biological aspect of Ancestor more info
located_in cytoplasm	IEA Inferred from Electronic Annotation more info
located_in cytoplasm	ISS Inferred from Sequence or Structural Similarity more info

General protein information

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Preferred Names: tumor necrosis factor alpha-induced protein 8-like protein 1

Names: TNF alpha-induced protein 8-like protein 1; TNFAIP8-like protein 1; tumor necrosis factor, alpha-induced protein 8-like protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.