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    tmem59l transmembrane protein 59-like [ Danio rerio (zebrafish) ]

    Gene ID: 406646, updated on 9-Dec-2024

    Summary

    Official Symbol
    tmem59lprovided by ZNC
    Official Full Name
    transmembrane protein 59-likeprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-040426-2651
    See related
    Ensembl:ENSDARG00000003655 AllianceGenome:ZFIN:ZDB-GENE-040426-2651
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    zgc:63977; wu:fi68e12
    Summary
    Acts upstream of or within axon extension. Predicted to be located in Golgi membrane. Is expressed in nervous system; neural tube; and trigeminal placode. Orthologous to human TMEM59L (transmembrane protein 59 like). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
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    Genomic context

    See tmem59l in Genome Data Viewer
    Location:
    chromosome: 22
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 22 NC_007133.7 (21128110..21150538, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 22 NC_007133.6 (21103132..21125560, complement)

    Chromosome 22 - NC_007133.7Genomic Context describing neighboring genes Neighboring gene single stranded DNA binding protein 4 Neighboring gene uncharacterized LOC137488923 Neighboring gene uncharacterized LOC137488924 Neighboring gene cytokine receptor-like factor 1b Neighboring gene required for excision 1-B domain containing

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Markers

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    acts_upstream_of_or_within axon extension IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in Golgi membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    transmembrane protein 59-like

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_213337.2NP_998502.2  transmembrane protein 59-like precursor

      See identical proteins and their annotated locations for NP_998502.2

      Status: VALIDATED

      Source sequence(s)
      BC154612, CU463178
      UniProtKB/TrEMBL
      A0A8M1PPN8, A8WG81
      Related
      ENSDARP00000016439.8, ENSDART00000027345.10
      Conserved Domains (1) summary
      pfam12280
      Location:64271
      BSMAP; Brain specific membrane anchored protein

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007133.7 Reference GRCz11 Primary Assembly

      Range
      21128110..21150538 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)