syne2b spectrin repeat containing, nuclear envelope 2b [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: syne2bprovided by ZNC
Official Full Name: spectrin repeat containing, nuclear envelope 2bprovided by ZNC
Primary source: ZFIN:ZDB-GENE-071218-5
See related: AllianceGenome:ZFIN:ZDB-GENE-071218-5
Gene type: protein coding
RefSeq status: MODEL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: id:ibd5137; wu:fc12c11; wu:fc31e06; wu:fc62a06; si:dkey-249p9.3; si:dkeyp-77c8.1; si:dkeyp-77c8.2; si:dkeyp-77c8.3; si:dkeyp-77c8.4; si:dkeyp-77c8.5
Summary: Predicted to enable actin binding activity. Acts upstream of or within actin filament organization and epiboly. Predicted to be located in cytoplasm; cytoskeleton; and nuclear outer membrane. Is expressed in several structures, including axis; neural keel; primary neurons; shield; and tail bud. Human ortholog(s) of this gene implicated in autosomal dominant Emery-Dreifuss muscular dystrophy 5. Orthologous to human SYNE2 (spectrin repeat containing nuclear envelope protein 2). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs: all
NEW: Try the new Gene table
Try the new Transcript table

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	13	NC_007124.7 (37075317..37270241, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	13	NC_007124.6 (36949427..37134867, complement)

Chromosome 13 - NC_007124.7 Genomic Context describing neighboring genes

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Submit: New GeneRIF Correction

Products	Interactant	Other Gene	Complex	Source	Pubs	Description

Function	Evidence Code	Pubs
enables actin binding	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within actin filament organization	IMP Inferred from Mutant Phenotype more info	PubMed
acts_upstream_of_or_within epiboly	IMP Inferred from Mutant Phenotype more info	PubMed

Component	Evidence Code	Pubs
located_in cytoplasm	IEA Inferred from Electronic Annotation more info
located_in cytoskeleton	IEA Inferred from Electronic Annotation more info
located_in membrane	IEA Inferred from Electronic Annotation more info
located_in nuclear outer membrane	IEA Inferred from Electronic Annotation more info
located_in nucleus	IEA Inferred from Electronic Annotation more info