pnisr PNN-interacting serine/arginine-rich protein [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: pnisrprovided by ZNC
Official Full Name: PNN-interacting serine/arginine-rich proteinprovided by ZNC
Primary source: ZFIN:ZDB-GENE-030131-362
See related: Ensembl:ENSDARG00000069855 AllianceGenome:ZFIN:ZDB-GENE-030131-362
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: sfrs18; srsf18; fb24d01; wu:fb24d01; zgc:162100
Summary: Predicted to be active in nuclear speck and presynaptic active zone. Orthologous to human PNISR (PNN interacting serine and arginine rich protein). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 16

Exon count:: 12

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	16	NC_007127.7 (32664350..32672366, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	16	NC_007127.6 (32710320..32718336, complement)

Chromosome 16 - NC_007127.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

fb24d01 (e-PCR)
- UniSTS:188988

fb24d01.x1 (e-PCR)
- UniSTS:203084

fk35h12.y1 (e-PCR)
- UniSTS:200901

Gene Ontology Provided by ZFIN

Component	Evidence Code	Pubs
is_active_in nuclear speck	IBA Inferred from Biological aspect of Ancestor more info
is_active_in presynaptic active zone	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: arginine/serine-rich protein PNISR

Names: serine/arginine-rich splicing factor 18; splicing factor, arginine/serine-rich 18

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.