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    si:ch211-274k16.9 si:ch211-274k16.9 [ Danio rerio (zebrafish) ]

    Gene ID: 571286, updated on 9-Dec-2024

    Summary

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    Official Symbol
    si:ch211-274k16.9provided by ZNC
    Official Full Name
    si:ch211-274k16.9provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-110408-30
    See related
    Ensembl:ENSDARG00000095918 AllianceGenome:ZFIN:ZDB-GENE-110408-30
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Summary
    Predicted to be located in membrane. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    human all
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    Genomic context

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    See si:ch211-274k16.9 in Genome Data Viewer
    Location:
    chromosome: 22
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 22 NC_007133.7 (6283189..6288382, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 22 NC_007133.6 (6254919..6260217, complement)

    Chromosome 22 - NC_007133.7Genomic Context describing neighboring genes Neighboring gene si:ch211-274k16.2 Neighboring gene uncharacterized LOC100003040 Neighboring gene ribonuclease like 4 Neighboring gene carcinoembryonic antigen-related cell adhesion molecule 1-like Neighboring gene ribonuclease like 2 Neighboring gene zgc:113298

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    Related articles in PubMed

    1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by ZFIN

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    carcinoembryonic antigen-related cell adhesion molecule 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007133.7 Reference GRCz11 Primary Assembly

      Range
      6283189..6288382 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_068216405.1 → XP_068072506.1  carcinoembryonic antigen-related cell adhesion molecule 4

      UniProtKB/TrEMBL
      A0A8N7UTI2
      Related
      ENSDARP00000125096.1, ENSDART00000149877.2
    Nucleotide Protein Strain
    Heading Accession and Version

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