thap12a THAP domain containing 12a [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: thap12aprovided by ZNC
Official Full Name: THAP domain containing 12aprovided by ZNC
Primary source: ZFIN:ZDB-GENE-040426-2045
See related: Ensembl:ENSDARG00000042489 AllianceGenome:ZFIN:ZDB-GENE-040426-2045
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: prkrir; fb55g11; prkrira; prkrirl; zgc:55697; wu:fb55g11
Summary: Predicted to enable DNA binding activity; kinase activity; and metal ion binding activity. Predicted to act upstream of or within phosphorylation. Orthologous to human THAP12 (THAP domain containing 12). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs: all
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Genomic context

Location:: chromosome: 10

Exon count:: 5

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	10	NC_007121.7 (32058817..32064405)
105	previous assembly	GRCz10 (GCF_000002035.5)	10	NC_007121.6 (32114957..32120545)

Chromosome 10 - NC_007121.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

fb55g11.x1 (e-PCR)
- UniSTS:203331

AI477855 (e-PCR)
- UniSTS:206437

Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables DNA binding	IEA Inferred from Electronic Annotation more info
enables kinase activity	IEA Inferred from Electronic Annotation more info
enables metal ion binding	IEA Inferred from Electronic Annotation more info
enables transferase activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within phosphorylation	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: THAP domain containing 12a

Names: protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor) a; protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor) like

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.