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    hebp2 heme binding protein 2 [ Danio rerio (zebrafish) ]

    Gene ID: 393167, updated on 9-Dec-2024

    Summary

    Official Symbol
    hebp2provided by ZNC
    Official Full Name
    heme binding protein 2provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-040426-914
    See related
    Ensembl:ENSDARG00000042630 AllianceGenome:ZFIN:ZDB-GENE-040426-914
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    soul1; zgc:56136
    Summary
    Predicted to enable heme binding activity. Predicted to be active in cytoplasm. Is expressed in several structures, including extension; hypophysis; neuromast; peripheral olfactory organ; and yolk syncytial layer. Orthologous to human HEBP2 (heme binding protein 2). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See hebp2 in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 20 NC_007131.7 (30894224..30900947, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 20 NC_007131.6 (30991345..30998068, complement)

    Chromosome 20 - NC_007131.7Genomic Context describing neighboring genes Neighboring gene acyl-Coenzyme A binding domain containing 3 Neighboring gene NHS-like 1b Neighboring gene kinesin family member 25 Neighboring gene acetyl-CoA acetyltransferase 2

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Clone Names

    • MGC56136

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables heme binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_200198.1NP_956492.1  heme-binding protein 2

      See identical proteins and their annotated locations for NP_956492.1

      Status: PROVISIONAL

      Source sequence(s)
      BC045936
      UniProtKB/TrEMBL
      Q7ZVA9
      Related
      ENSDARP00000062535.4, ENSDART00000062536.6
      Conserved Domains (1) summary
      pfam04832
      Location:27186
      SOUL; SOUL heme-binding protein

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007131.7 Reference GRCz11 Primary Assembly

      Range
      30894224..30900947 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)