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    cnpy4 canopy FGF signaling regulator 4 [ Danio rerio (zebrafish) ]

    Gene ID: 568776, updated on 9-Dec-2024

    Summary

    Official Symbol
    cnpy4provided by ZNC
    Official Full Name
    canopy FGF signaling regulator 4provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-060315-5
    See related
    Ensembl:ENSDARG00000055797 AllianceGenome:ZFIN:ZDB-GENE-060315-5
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Summary
    Predicted to enable signaling receptor binding activity. Predicted to be located in extracellular region. Orthologous to human CNPY4 (canopy FGF signaling regulator 4). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See cnpy4 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 7 NC_007118.7 (20459671..20464098, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 7 NC_007118.6 (20207703..20212130, complement)

    Chromosome 7 - NC_007118.7Genomic Context describing neighboring genes Neighboring gene si:dkey-19b23.12 Neighboring gene netrin 5 Neighboring gene transfer RNA isoleucine (anticodon UAU) Neighboring gene transfer RNA isoleucine (anticodon UAU) Neighboring gene transfer RNA isoleucine (anticodon UAU)

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General protein information

    Preferred Names
    protein canopy 4
    Names
    PRAT4
    canopy4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001039513.1NP_001034602.1  protein canopy 4 precursor

      See identical proteins and their annotated locations for NP_001034602.1

      Status: PROVISIONAL

      Source sequence(s)
      AB201386
      UniProtKB/Swiss-Prot
      Q2L6K8
      UniProtKB/TrEMBL
      B2GR90
      Related
      ENSDARP00000072654.4, ENSDART00000078192.5
      Conserved Domains (1) summary
      pfam11938
      Location:26174
      DUF3456; TLR4 regulator and MIR-interacting MSAP

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007118.7 Reference GRCz11 Primary Assembly

      Range
      20459671..20464098 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018394685.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      71451..75876 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)