btr30 bloodthirsty-related gene family, member 30 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: btr30provided by ZNC
Official Full Name: bloodthirsty-related gene family, member 30provided by ZNC
Primary source: ZFIN:ZDB-GENE-040426-1407
See related: Ensembl:ENSDARG00000102591 AllianceGenome:ZFIN:ZDB-GENE-040426-1407
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: zgc:64214
Summary: Predicted to enable zinc ion binding activity. Predicted to be located in cytoplasm. Is expressed in EVL; periderm; and pharynx. Orthologous to human TRIM41 (tripartite motif containing 41). [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

Location:: chromosome: 19

Exon count:: 10

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	19	NC_007130.7 (48139755..48145313)
105	previous assembly	GRCz10 (GCF_000002035.5)	Unplaced Scaffold	NW_008805456.1 (3022..8976, complement)

Chromosome 19 - NC_007130.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

G45263 (e-PCR)
- UniSTS:106065

z1799A (e-PCR)
- UniSTS:205155

Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables metal ion binding	IEA Inferred from Electronic Annotation more info
enables zinc ion binding	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in cytoplasm	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: bloodthirsty-related gene family, member 30

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_200422.1 → NP_956716.1 bloodthirsty-related gene family, member 30

See identical proteins and their annotated locations for NP_956716.1

Status: PROVISIONAL

Source sequence(s)

BC054643

UniProtKB/TrEMBL

Q7T290

Related

ENSDARP00000131276.1, ENSDART00000170439.2

Conserved Domains (3) summary

pfam00643
Location:152 → 191

zf-B_box; B-box zinc finger

pfam15227
Location:13 → 52

zf-C3HC4_4; zinc finger of C3HC4-type, RING

cd13733
Location:407 → 575

SPRY_PRY_C-I_1; PRY/SPRY domain in tripartite motif-containing (TRIM) proteins, including TRIM5, TRIM6, TRIM7, TRIM10, TRIM11, TRIM17, TRIM20, TRIM21, TRIM27, TRIM35, TRIM38, TRIM41, TRIM50, TRIM58, TRIM60, TRIM62, TRIM69, TRIM72, NF7 and bloodthirsty