csnk2b casein kinase 2, beta polypeptide [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: csnk2bprovided by ZNC
Official Full Name: casein kinase 2, beta polypeptideprovided by ZNC
Primary source: ZFIN:ZDB-GENE-990415-29
See related: Ensembl:ENSDARG00000077776 AllianceGenome:ZFIN:ZDB-GENE-990415-29
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: ck2b; wu:fa16g01
Summary: Predicted to enable protein kinase regulator activity. Acts upstream of or within erythrocyte differentiation. Predicted to be located in nucleus. Predicted to be part of PcG protein complex and protein kinase CK2 complex. Predicted to be active in cytoplasm. Orthologous to human CSNK2B (casein kinase 2 beta). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 19

Exon count:: 7

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	19	NC_007130.7 (26730298..26736356, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	19	NC_007130.6 (27146075..27152166, complement)

Chromosome 19 - NC_007130.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Markers

S76877 (e-PCR)
- UniSTS:205665

S76877 (e-PCR)
- UniSTS:205420

fa16g01.s1 (e-PCR)
- UniSTS:202405

csk2b (e-PCR)
- UniSTS:204737

Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables kinase activity	IEA Inferred from Electronic Annotation more info
enables metal ion binding	IEA Inferred from Electronic Annotation more info
enables protein kinase regulator activity	IBA Inferred from Biological aspect of Ancestor more info
enables protein kinase regulator activity	IEA Inferred from Electronic Annotation more info
enables transferase activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within Wnt signaling pathway	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within erythrocyte differentiation	IMP Inferred from Mutant Phenotype more info	PubMed
acts_upstream_of_or_within phosphorylation	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
part_of PcG protein complex	ISS Inferred from Sequence or Structural Similarity more info
is_active_in cytoplasm	IBA Inferred from Biological aspect of Ancestor more info
located_in nucleus	IEA Inferred from Electronic Annotation more info
part_of protein kinase CK2 complex	IBA Inferred from Biological aspect of Ancestor more info
part_of protein kinase CK2 complex	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: casein kinase II subunit beta

Names: CK II beta; casein kinase 2 beta

NP_571262.1

EC 2.7.11.1

XP_005170056.1

EC 2.7.11.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.