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    fam117ab family with sequence similarity 117 member Ab [ Danio rerio (zebrafish) ]

    Gene ID: 100151756, updated on 4-Jan-2025

    Summary

    Official Symbol
    fam117abprovided by ZNC
    Official Full Name
    family with sequence similarity 117 member Abprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-080515-7
    See related
    Ensembl:ENSDARG00000079252 AllianceGenome:ZFIN:ZDB-GENE-080515-7
    Gene type
    protein coding
    RefSeq status
    PREDICTED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    zgc:175133
    Summary
    Orthologous to human FAM117A (family with sequence similarity 117 member A). [provided by Alliance of Genome Resources, Jan 2025]
    Orthologs
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    Genomic context

    See fam117ab in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 12 NC_007123.7 (9849463..9876076)
    105 previous assembly GRCz10 (GCF_000002035.5) 12 NC_007123.6 (9811633..9838229)

    Chromosome 12 - NC_007123.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108191783 Neighboring gene RUN domain containing 3Ab Neighboring gene NDUFA4 mitochondrial complex associated b Neighboring gene nerve growth factor receptor b

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General protein information

    Preferred Names
    uncharacterized protein LOC100151756

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001127471.1NP_001120943.1  uncharacterized protein LOC100151756

      See identical proteins and their annotated locations for NP_001120943.1

      Status: PREDICTED

      Source sequence(s)
      BC161667
      UniProtKB/TrEMBL
      B1WB93
      Related
      ENSDARP00000098069.1, ENSDART00000110458.3
      Conserved Domains (1) summary
      pfam15388
      Location:48324
      FAM117; Protein Family FAM117

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007123.7 Reference GRCz11 Primary Assembly

      Range
      9849463..9876076
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_068224478.1XP_068080579.1  uncharacterized protein LOC100151756 isoform X1

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018394832.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      72770..99366
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)