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    cal-1 Calmodulin-like protein;EF-hand domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 179715, updated on 9-Dec-2024

    Summary

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    Official Symbol
    cal-1
    Official Full Name
    Calmodulin-like protein;EF-hand domain-containing protein
    Primary source
    WormBase:WBGene00000285
    Locus tag
    CELE_C13C12.1
    See related
    AllianceGenome:WB:WBGene00000285
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable calcium ion binding activity. Predicted to be active in centrosome and cytoplasm. Orthologous to human CALML3 (calmodulin like 3); CALML4 (calmodulin like 4); and CALML5 (calmodulin like 5). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See cal-1 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    3
    Sequence:
    Chromosome: V; NC_003283.11 (12514835..12517248, complement)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ShKT domain-containing protein Neighboring gene legumain Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A novel calmodulin-like gene from the nematode Caenorhabditis elegans. Salvato M, et al. J Mol Biol, 1986 Aug 5. PMID 3783700
    2. Molecular evolution of the multiple calmodulin-like cal genes in C. elegans and in nematodes. Karabinos A. Dev Genes Evol, 2016 Sep. PMID 27558386
    3. Natural variation and population genetics of Caenorhabditis elegans. Barrière A, et al. WormBook, 2005 Dec 26. PMID 18050391, Free PMC Article
    4. Rates of deleterious mutation and the evolution of sex in Caenorhabditis. Cutter AD, et al. J Evol Biol, 2003 Sep. PMID 14635896
    5. Cytokinesis is not controlled by calmodulin or myosin light chain kinase in the Caenorhabditis elegans early embryo. Batchelder EL, et al. FEBS Lett, 2007 Sep 4. PMID 17716666, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables calcium ion binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in centrosome IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    Calmodulin-like protein;EF-hand domain-containing protein
    NP_001256428.1
    • Confirmed by transcript evidence
    NP_001256429.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      12514835..12517248 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001269499.3 → NP_001256428.1  EF-hand domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001256428.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      H9G2Z0
      Conserved Domains (1) summary
      cl25352
      Location:36 → 177
      EFh_PEF; The penta-EF hand (PEF) family

    2. NM_001269500.2 → NP_001256429.1  Calmodulin-like protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001256429.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P04630
      Conserved Domains (1) summary
      PTZ00184
      Location:17 → 158
      PTZ00184; calmodulin; Provisional
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P04630.1

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