U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    R07B7.10 SLC (SoLute Carrier) homolog [ Caenorhabditis elegans ]

    Gene ID: 187658, updated on 9-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    R07B7.10
    Official Full Name
    SLC (SoLute Carrier) homolog
    Primary source
    WormBase:WBGene00011094
    Locus tag
    CELE_R07B7.10
    See related
    AllianceGenome:WB:WBGene00011094
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable high-affinity L-arginine transmembrane transporter activity and high-affinity lysine transmembrane transporter activity. Predicted to be involved in mitochondrial L-ornithine transmembrane transport. Predicted to be located in membrane. Predicted to be active in mitochondrion. Orthologous to human SLC25A45 (solute carrier family 25 member 45); SLC25A47 (solute carrier family 25 member 47); and SLC25A48 (solute carrier family 25 member 48). [provided by Alliance of Genome Resources, Dec 2024]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See R07B7.10 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    7
    Sequence:
    Chromosome: V; NC_003283.11 (12083216..12086460)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Nucleotid_trans domain-containing protein Neighboring gene ncRNA Neighboring gene Lipase_GDSL domain-containing protein Neighboring gene Lipase_GDSL domain-containing protein Neighboring gene Alpha-galactosidase Neighboring gene ncRNA Neighboring gene Glycosyltransferase family 92 protein R07B7.12

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables transmembrane transporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in L-arginine transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    is_active_in mitochondrion IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    SLC (SoLute Carrier) homolog
    NP_506030.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      12083216..12086460
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_073629.4 → NP_506030.2  SLC (SoLute Carrier) homolog [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_506030.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q21800
      Conserved Domains (1) summary
      pfam00153
      Location:199 → 284
      Mito_carr; Mitochondrial carrier protein
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools