cyp-34A6 CYtochrome P450 family [Caenorhabditis elegans] - Gene

Summary

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Official Symbol: cyp-34A6
Official Full Name: CYtochrome P450 family
Primary source: WormBase:WBGene00015041
Locus tag: CELE_B0213.11
See related: AllianceGenome:WB:WBGene00015041
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Caenorhabditis elegans (strain: Bristol N2)
Lineage: Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary: Predicted to enable heme binding activity; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen; and steroid hydroxylase activity. Predicted to be involved in organic acid metabolic process and xenobiotic metabolic process. Predicted to be active in cytoplasm and intracellular membrane-bounded organelle. Human ortholog(s) of this gene implicated in several diseases, including alcohol dependence; autoimmune hepatitis; extrapyramidal and movement disease; head and neck squamous cell carcinoma; and leukemia (multiple). Orthologous to human CYP2D6 (cytochrome P450 family 2 subfamily D member 6); CYP2S1 (cytochrome P450 family 2 subfamily S member 1); and CYP2W1 (cytochrome P450 family 2 subfamily W member 1). [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See cyp-34A6 in Genome Data Viewer

Location:: chromosome: V

Exon count:: 7

Sequence:: Chromosome: V; NC_003283.11 (3958160..3961335, complement)

Chromosome V - NC_003283.11 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Markers

B0213.11 (e-PCR)
- UniSTS:313368

B0213.12 (e-PCR)
- UniSTS:306141

Homology

Orthologs from OrthoDB

Gene Ontology Provided by WormBase

Function	Evidence Code	Pubs
enables heme binding	IBA Inferred from Biological aspect of Ancestor more info
enables heme binding	IEA Inferred from Electronic Annotation more info
enables iron ion binding	IEA Inferred from Electronic Annotation more info
enables metal ion binding	IEA Inferred from Electronic Annotation more info
enables monooxygenase activity	IEA Inferred from Electronic Annotation more info
enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEA Inferred from Electronic Annotation more info
enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen	IBA Inferred from Biological aspect of Ancestor more info

Process	Evidence Code	Pubs
involved_in organic acid metabolic process	IBA Inferred from Biological aspect of Ancestor more info
involved_in xenobiotic metabolic process	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
is_active_in cytoplasm	IBA Inferred from Biological aspect of Ancestor more info
is_active_in intracellular membrane-bounded organelle	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: CYtochrome P450 family

NP_001256031.1

Confirmed by transcript evidence

NP_001317794.1

Confirmed by transcript evidence

NP_001380106.1

Product from WormBase gene class cyp;
Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003283.11 Reference assembly

Range

3958160..3961335 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_001269102.3 → NP_001256031.1 CYtochrome P450 family [Caenorhabditis elegans]

See identical proteins and their annotated locations for NP_001256031.1

Status: REVIEWED

UniProtKB/TrEMBL

O44656

Conserved Domains (1) summary

pfam00067
Location:26 → 494

p450; Cytochrome P450
NM_001392497.1 → NP_001380106.1 CYtochrome P450 family [Caenorhabditis elegans]

Status: REVIEWED

UniProtKB/TrEMBL

H1ZUV4

Conserved Domains (1) summary

cl41757
Location:1 → 320

cytochrome_P450; cytochrome P450 (CYP) superfamily
NM_001330821.3 → NP_001317794.1 CYtochrome P450 family [Caenorhabditis elegans]

Status: REVIEWED

UniProtKB/TrEMBL

A0A164D3C9