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    sdz-15 Skn-1 dependent zygotic transcript 15 protein [ Caenorhabditis elegans ]

    Gene ID: 184905, updated on 9-Dec-2024

    Summary

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    Official Symbol
    sdz-15
    Official Full Name
    Skn-1 dependent zygotic transcript 15 protein
    Primary source
    WormBase:WBGene00017752
    Locus tag
    CELE_F23F12.4
    See related
    AllianceGenome:WB:WBGene00017752
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Involved in embryo development. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See sdz-15 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    3
    Sequence:
    Chromosome: III; NC_003281.10 (6498476..6500110)

    Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene Major facilitator superfamily (MFS) profile domain-containing protein Neighboring gene Uncharacterized protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003281.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification of lineage-specific zygotic transcripts in early Caenorhabditis elegans embryos. Robertson SM, et al. Dev Biol, 2004 Dec 15. PMID 15581881
    2. Evidence of glutathione transferase complexing and signaling in the model nematode Caenorhabditis elegans using a pull-down proteomic assay. Greetham D, et al. Proteomics, 2004 Jul. PMID 15221760
    3. The F-box protein family. Kipreos ET, et al. Genome Biol, 2000. PMID 11178263, Free PMC Article
    4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in embryo development ending in birth or egg hatching IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    Skn-1 dependent zygotic transcript 15 protein
    NP_498432.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003281.10 Reference assembly

      Range
      6498476..6500110
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_066031.3 → NP_498432.1  Skn-1 dependent zygotic transcript 15 protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_498432.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P46500
      Conserved Domains (1) summary
      pfam07735
      Location:237 → 274
      FBA_2; F-box associated
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P46500.1

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