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    dnj-30 J domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 171833, updated on 9-Dec-2024

    Summary

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    Official Symbol
    dnj-30
    Official Full Name
    J domain-containing protein
    Primary source
    WormBase:WBGene00001048
    Locus tag
    CELE_Y71F9B.16
    See related
    AllianceGenome:WB:WBGene00001048
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be active in nucleus. Orthologous to human DNAJC8 (DnaJ heat shock protein family (Hsp40) member C8). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See dnj-30 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    4
    Sequence:
    Chromosome: I; NC_003279.8 (2718027..2721475, complement)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Frizzled-4 Neighboring gene Cyclin N-terminal domain-containing protein Neighboring gene putative small nuclear ribonucleoprotein G

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003279.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Characterization of the intracellular neurexin interactome by in vivo proximity ligation suggests its involvement in presynaptic actin assembly. Schaan Profes M, et al. PLoS Biol, 2024 Jan. PMID 38252619, Free PMC Article
    2. Defect-buffering cellular plasticity increases robustness of metazoan embryogenesis. Xiao L, et al. Cell Syst, 2022 Aug 17. PMID 35882226
    3. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
    4. OrthoList: a compendium of C. elegans genes with human orthologs. Shaye DD, et al. PLoS One, 2011. PMID 21647448, Free PMC Article
    5. OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes. Kim W, et al. Genetics, 2018 Oct. PMID 30120140, Free PMC Article

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    J domain-containing protein
    NP_001293377.1
    • Confirmed by transcript evidence
    NP_491030.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      2718027..2721475 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_058629.6 → NP_491030.1  J domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_491030.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q95Y44
      Conserved Domains (2) summary
      smart00271
      Location:41 → 97
      DnaJ; DnaJ molecular chaperone homology domain
      cl19727
      Location:167 → 206
      DUF1451; Zinc-ribbon containing domain

    2. NM_001306448.3 → NP_001293377.1  J domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001293377.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A078BS22
      Conserved Domains (1) summary
      cl19727
      Location:50 → 89
      DUF1451; Zinc-ribbon containing domain
    Nucleotide Protein
    Heading Accession and Version

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