U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    pqn-22 ZM domain-containing protein;Zasp-like motif domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 177369, updated on 28-Oct-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    pqn-22
    Official Full Name
    ZM domain-containing protein;Zasp-like motif domain-containing protein
    Primary source
    WormBase:WBGene00004112
    Locus tag
    CELE_C46G7.4
    See related
    AllianceGenome:WB:WBGene00004112
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See pqn-22 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    21
    Sequence:
    Chromosome: IV; NC_003282.8 (6019672..6033639, complement)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Ribonuclease kappa Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003282.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. The TORC1 phosphoproteome in C. elegans reveals roles in transcription and autophagy. Sewell AK, et al. iScience, 2022 May 20. PMID 35479415, Free PMC Article
    2. Amino acid and protein specificity of protein fatty acylation in C. elegans. Zhang B, et al. Proc Natl Acad Sci U S A, 2024 Jan 30. PMID 38252833, Free PMC Article
    3. Depletion of endogenously biotinylated carboxylases enhances the sensitivity of TurboID-mediated proximity labeling in Caenorhabditis elegans. Artan M, et al. J Biol Chem, 2022 Sep. PMID 35933017, Free PMC Article
    4. Interactome analysis of Caenorhabditis elegans synapses by TurboID-based proximity labeling. Artan M, et al. J Biol Chem, 2021 Sep. PMID 34416233, Free PMC Article
    5. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    General protein information

    Go to the top of the page Help
    Preferred Names
    ZM domain-containing protein;Zasp-like motif domain-containing protein
    NP_001293796.1
    • Confirmed by transcript evidence
    NP_001293797.1
    • Confirmed by transcript evidence
    NP_001293798.1
    • Confirmed by transcript evidence
    NP_001293799.1
    • Confirmed by transcript evidence
    NP_001293800.1
    • Confirmed by transcript evidence
    NP_001293801.1
    • Confirmed by transcript evidence
    NP_001293802.1
    • Confirmed by transcript evidence
    NP_001293803.1
    • Partially confirmed by transcript evidence
    NP_001293804.1
    • Partially confirmed by transcript evidence
    NP_001293805.1
    • Partially confirmed by transcript evidence
    NP_001293806.1
    • Partially confirmed by transcript evidence
    NP_001293807.1
    • Partially confirmed by transcript evidence
    NP_001293808.1
    • Partially confirmed by transcript evidence
    NP_001293809.1
    • Partially confirmed by transcript evidence
    NP_001368418.1
    • Confirmed by transcript evidence
    NP_001368419.1
    • Confirmed by transcript evidence
    NP_001368420.1
    • Confirmed by transcript evidence
    NP_500906.2
    • Confirmed by transcript evidence
    NP_500907.2
    • Confirmed by transcript evidence
    NP_500908.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      6019672..6033639 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001306868.2 → NP_001293797.1  Zasp-like motif domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001293797.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      V6CLV0
      Conserved Domains (1) summary
      smart00735
      Location:3 → 28
      ZM; ZASP-like motif

    2. NM_068506.3 → NP_500907.2  Zasp-like motif domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_500907.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      H2KZA3
      Conserved Domains (2) summary
      smart00735
      Location:88 → 113
      ZM; ZASP-like motif
      pfam15936
      Location:88 → 146
      DUF4749; Domain of unknown function (DUF4749)

    3. NM_001306869.4 → NP_001293798.1  Zasp-like motif domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001293798.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      V6CLU3
      Conserved Domains (2) summary
      smart00735
      Location:3 → 28
      ZM; ZASP-like motif
      pfam15936
      Location:5 → 61
      DUF4749; Domain of unknown function (DUF4749)

    4. NM_001306877.4 → NP_001293806.1  Zasp-like motif domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001293806.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      V6CKJ1
      Conserved Domains (2) summary
      smart00735
      Location:88 → 113
      ZM; ZASP-like motif
      pfam15936
      Location:90 → 146
      DUF4749; Domain of unknown function (DUF4749)

    5. NM_068505.4 → NP_500906.2  Zasp-like motif domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_500906.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      H2KZA4
      Conserved Domains (2) summary
      smart00735
      Location:3 → 28
      ZM; ZASP-like motif
      pfam15936
      Location:3 → 61
      DUF4749; Domain of unknown function (DUF4749)

    6. NM_001380256.2 → NP_001368419.1  ZM domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      V6CLP8

    7. NM_001306870.4 → NP_001293799.1  Zasp-like motif domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001293799.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      V6CLQ4
      Conserved Domains (2) summary
      smart00735
      Location:3 → 28
      ZM; ZASP-like motif
      pfam15936
      Location:5 → 61
      DUF4749; Domain of unknown function (DUF4749)

    8. NM_001306876.3 → NP_001293805.1  Zasp-like motif domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001293805.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      V6CJD2
      Conserved Domains (2) summary
      smart00735
      Location:88 → 113
      ZM; ZASP-like motif
      pfam15936
      Location:90 → 146
      DUF4749; Domain of unknown function (DUF4749)

    9. NM_001306873.3 → NP_001293802.1  Zasp-like motif domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001293802.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      V6CLV6
      Conserved Domains (1) summary
      smart00735
      Location:3 → 28
      ZM; ZASP-like motif

    10. NM_001306871.3 → NP_001293800.1  Zasp-like motif domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001293800.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      V6CJC7
      Conserved Domains (1) summary
      smart00735
      Location:3 → 28
      ZM; ZASP-like motif

    11. NM_001306874.3 → NP_001293803.1  Zasp-like motif domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001293803.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      V6CLU8
      Conserved Domains (2) summary
      smart00735
      Location:88 → 113
      ZM; ZASP-like motif
      pfam15936
      Location:90 → 146
      DUF4749; Domain of unknown function (DUF4749)

    12. NM_001306880.3 → NP_001293809.1  Zasp-like motif domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001293809.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      V6CLR2
      Conserved Domains (2) summary
      smart00735
      Location:88 → 113
      ZM; ZASP-like motif
      pfam15936
      Location:90 → 146
      DUF4749; Domain of unknown function (DUF4749)

    13. NM_001306879.3 → NP_001293808.1  Zasp-like motif domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001293808.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      V6CLV2
      Conserved Domains (2) summary
      smart00735
      Location:88 → 113
      ZM; ZASP-like motif
      pfam15936
      Location:90 → 146
      DUF4749; Domain of unknown function (DUF4749)

    14. NM_001306878.3 → NP_001293807.1  Zasp-like motif domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001293807.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      V6CLW0
      Conserved Domains (2) summary
      smart00735
      Location:88 → 113
      ZM; ZASP-like motif
      pfam15936
      Location:90 → 146
      DUF4749; Domain of unknown function (DUF4749)

    15. NM_001306875.3 → NP_001293804.1  Zasp-like motif domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001293804.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      V6CLQ8
      Conserved Domains (2) summary
      smart00735
      Location:88 → 113
      ZM; ZASP-like motif
      pfam15936
      Location:90 → 146
      DUF4749; Domain of unknown function (DUF4749)

    16. NM_001306872.3 → NP_001293801.1  Zasp-like motif domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001293801.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      V6CKI4
      Conserved Domains (1) summary
      smart00735
      Location:3 → 28
      ZM; ZASP-like motif

    17. NM_001306867.3 → NP_001293796.1  Zasp-like motif domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001293796.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      V6CKH6
      Conserved Domains (2) summary
      smart00735
      Location:3 → 28
      ZM; ZASP-like motif
      pfam15936
      Location:5 → 61
      DUF4749; Domain of unknown function (DUF4749)

    18. NM_001380255.1 → NP_001368420.1  ZM domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      V6CJC4

    19. NM_001380257.1 → NP_001368418.1  ZM domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      V6CLT8

    20. NM_068507.6 → NP_500908.2  ZM domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_500908.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9TY23
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools