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    T16G1.6 CHK kinase-like domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 188554, updated on 9-Dec-2024

    Summary

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    Official Symbol
    T16G1.6
    Official Full Name
    CHK kinase-like domain-containing protein
    Primary source
    WormBase:WBGene00011800
    Locus tag
    CELE_T16G1.6
    See related
    AllianceGenome:WB:WBGene00011800
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable kinase activity. Is expressed in head neurons and intestine. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See T16G1.6 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    7
    Sequence:
    Chromosome: V; NC_003283.11 (12935538..12937174, complement)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Conserved secreted protein Neighboring gene CHK kinase-like domain-containing protein Neighboring gene CHK kinase-like domain-containing protein Neighboring gene CHK kinase-like domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. SH3 interactome conserves general function over specific form. Xin X, et al. Mol Syst Biol, 2013. PMID 23549480, Free PMC Article
    2. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    CHK kinase-like domain-containing protein
    NP_506234.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      12935538..12937174 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_073833.7 → NP_506234.2  CHK kinase-like domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_506234.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9XUP2
      Conserved Domains (1) summary
      pfam07914
      Location:8 → 417
      DUF1679; Protein of unknown function (DUF1679)
    Nucleotide Protein
    Heading Accession and Version

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