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    Tlnrd1 talin rod domain containing 1 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 308795, updated on 9-Dec-2024

    Summary

    Official Symbol
    Tlnrd1provided by RGD
    Official Full Name
    talin rod domain containing 1provided by RGD
    Primary source
    RGD:1311666
    See related
    EnsemblRapid:ENSRNOG00000012349 AllianceGenome:RGD:1311666
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    Mesdc1
    Summary
    Predicted to enable actin binding activity and identical protein binding activity. Predicted to be located in stress fiber. Orthologous to human TLNRD1 (talin rod domain containing 1). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
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    Genomic context

    See Tlnrd1 in Genome Data Viewer
    Location:
    1q31
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 1 NC_086019.1 (147273475..147275494, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 1 NC_051336.1 (137864340..137866359, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 1 NC_005100.4 (146027821..146029840, complement)

    Chromosome 1 - NC_086019.1Genomic Context describing neighboring genes Neighboring gene cilia and flagella associated protein 161 Neighboring gene ring finger and CHY zinc finger domain containing 1, pseudogene 1 Neighboring gene mesoderm development LRP chaperone Neighboring gene uncharacterized LOC134485147

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Clone Names

    • MGC109280

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables actin binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables actin binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables identical protein binding ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    located_in stress fiber ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    talin rod domain-containing protein 1
    Names
    mesoderm development candidate 1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001013149.1NP_001013167.1  talin rod domain-containing protein 1

      See identical proteins and their annotated locations for NP_001013167.1

      Status: PROVISIONAL

      Source sequence(s)
      BC091313
      UniProtKB/TrEMBL
      F7FGC8, Q5BJV3
      Related
      ENSRNOP00000016455.1, ENSRNOT00000016455.5

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086019.1 Reference GRCr8

      Range
      147273475..147275494 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)