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    LOC105372695 uncharacterized LOC105372695 [ Homo sapiens (human) ]

    Gene ID: 105372695, updated on 22-Oct-2024

    Summary

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    Gene symbol
    LOC105372695
    Gene description
    uncharacterized LOC105372695
    See related
    Ensembl:ENSG00000302965
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Restricted expression toward testis (RPKM 1.7) See more
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    Genomic context

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    See LOC105372695 in Genome Data Viewer
    Location:
    20q13.32
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 20 NC_000020.11 (58773425..58774811)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 20 NC_060944.1 (60556033..60557419)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 20 NC_000020.10 (57348481..57349867)

    Chromosome 20 - NC_000020.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124904942 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:57320681-57321180 Neighboring gene piezo type mechanosensitive ion channel component 1 pseudogene 2 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:57327629-57328292 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr20:57328293-57328958 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr20:57328959-57329622 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:57362050-57362726 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:57378241-57378944 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr20:57380351-57381052 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:57388251-57388750 Neighboring gene microRNA 296 Neighboring gene microRNA 298

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See variants in ClinVar

    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_134566.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      BX118153
      Related
      ENST00000790739.1

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000020.11 Reference GRCh38.p14 Primary Assembly

      Range
      58773425..58774811
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060944.1 Alternate T2T-CHM13v2.0

      Range
      60556033..60557419
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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