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    GLR2.7 glutamate receptor 2.7 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 817460, updated on 18-Sep-2024

    Summary

    Official Symbol
    GLR2.7
    Official Full Name
    glutamate receptor 2.7
    Primary source
    TAIR:AT2G29120
    Locus tag
    AT2G29120
    See related
    Araport:AT2G29120
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATGLR2.7; GLUTAMATE RECEPTOR 2.7; glutamate receptor 2.7; GLUTAMATE RECEPTOR 2.7; T9I4.20; T9I4_20
    Summary
    member of Putative ligand-gated ion channel subunit family
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    Genomic context

    See GLR2.7 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    5
    Sequence:
    Chromosome: 2; NC_003071.7 (12511246..12515947, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene glutamate receptor 2.9 Neighboring gene glutamate receptor 2.8 Neighboring gene ncRNA Neighboring gene ROTUNDIFOLIA like 2

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    NM_128469.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables calcium channel activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables glutamate receptor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables intracellularly ligand-gated monoatomic ion channel activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables ligand-gated monoatomic ion channel activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in calcium ion transport ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in calcium-mediated signaling ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in cellular response to amino acid stimulus ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    acts_upstream_of_or_within intracellular calcium ion homeostasis NAS
    Non-traceable Author Statement
    more info
    PubMed 
    acts_upstream_of_or_within response to light stimulus NAS
    Non-traceable Author Statement
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in plant-type vacuole HDA PubMed 
    located_in plasma membrane ISM
    Inferred from Sequence Model
    more info
     
    located_in plasma membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
     

    General protein information

    Preferred Names
    glutamate receptor 2.7
    NP_180476.3
    • glutamate receptor 2.7 (GLR2.7); FUNCTIONS IN: intracellular ligand-gated ion channel activity; INVOLVED IN: cellular calcium ion homeostasis, response to light stimulus; LOCATED IN: vacuole; EXPRESSED IN: stem, cotyledon, leaf whorl, leaf, stamen; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, LP.10 ten leaves visible, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Extracellular solute-binding protein, family 3 (InterPro:IPR001638), Ionotropic glutamate receptor (InterPro:IPR001320), Extracellular ligand-binding receptor (InterPro:IPR001828), Glutamate receptor-related (InterPro:IPR015683), Ionotropic glutamate-like receptor, plant (InterPro:IPR017103); BEST Arabidopsis thaliana protein match is: glutamate receptor 2.8 (TAIR:AT2G29110.1); Has 5217 Blast hits to 5121 proteins in 549 species: Archae - 76; Bacteria - 910; Metazoa - 3278; Fungi - 0; Plants - 643; Viruses - 0; Other Eukaryotes - 310 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      12511246..12515947 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_128469.4NP_180476.3  glutamate receptor 2.7 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_180476.3

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O81080, Q6RKN3, Q8LGN0, Q8RY02
      UniProtKB/TrEMBL
      A0A178VYH0
      Conserved Domains (4) summary
      cd06366
      Location:40421
      PBP1_GABAb_receptor; Ligand-binding domain of GABAb receptors, which are metabotropic transmembrane receptors for gamma-aminobutyric acid (GABA)
      cd13686
      Location:460799
      GluR_Plant; Plant glutamate receptor domain; the type 2 periplasmic binding protein fold
      pfam00060
      Location:584832
      Lig_chan; Ligand-gated ion channel
      pfam01094
      Location:54405
      ANF_receptor; Receptor family ligand binding region