U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    DUF241 domain protein, putative (DUF241) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 816275, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Full Name
    DUF241 domain protein, putative (DUF241)
    Primary source
    TAIR:AT2G17680
    Locus tag
    AT2G17680
    See related
    Araport:AT2G17680
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T17A5.19; T17A5_19
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: 2
    Exon count:
    1
    Sequence:
    Chromosome: 2; NC_003071.7 (7679008..7680378)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene AMP-dependent synthetase and ligase family protein Neighboring gene RPM1-interacting protein 4 (RIN4) family protein Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein Neighboring gene outer envelope protein Neighboring gene ascorbic acid mannose pathway regulator, putative (DUF295) Neighboring gene ACT-like protein tyrosine kinase family protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Identification and dynamics of Arabidopsis adaptor protein-2 complex and its involvement in floral organ development. Yamaoka S, et al. Plant Cell, 2013 Aug. PMID 23975897, Free PMC Article
    2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Homology

    NM_127322.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in root development IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in shoot system development IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    DUF241 domain protein, putative (DUF241)
    NP_179359.1
    • Arabidopsis protein of unknown function (DUF241); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF241, plant (InterPro:IPR004320); BEST Arabidopsis thaliana protein match is: Arabidopsis protein of unknown function (DUF241) (TAIR:AT4G35690.1); Has 438 Blast hits to 428 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 438; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      7679008..7680378
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_127322.2 → NP_179359.1  DUF241 domain protein, putative (DUF241) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_179359.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654F4I4, A0A7G2EAW1, Q6DR26, Q6E272
      Conserved Domains (1) summary
      pfam03087
      Location:51 → 289
      DUF241; Arabidopsis protein of unknown function
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools