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    SOUL heme-binding family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 844182, updated on 18-Sep-2024

    Summary

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    Official Full Name
    SOUL heme-binding family protein
    Primary source
    TAIR:AT1G78460
    Locus tag
    AT1G78460
    See related
    Araport:AT1G78460
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F3F9.3
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    2
    Sequence:
    Chromosome: 1; NC_003070.9 (29518184..29519323, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene gibberellin 2-beta-dioxygenase Neighboring gene SOUL heme-binding family protein Neighboring gene ncRNA Neighboring gene F-box/LRR protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_106493.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    SOUL heme-binding family protein
    NP_177967.1
    • SOUL heme-binding family protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SOUL haem-binding protein (InterPro:IPR006917); BEST Arabidopsis thaliana protein match is: SOUL heme-binding family protein (TAIR:AT1G17100.1); Has 1017 Blast hits to 990 proteins in 102 species: Archae - 6; Bacteria - 81; Metazoa - 199; Fungi - 0; Plants - 147; Viruses - 0; Other Eukaryotes - 584 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      29518184..29519323 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_106493.4 → NP_177967.1  SOUL heme-binding family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_177967.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WHL1, Q9SYN5
      Conserved Domains (1) summary
      pfam04832
      Location:43 → 216
      SOUL; SOUL heme-binding protein
    Nucleotide Protein
    Heading Accession and Version

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