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    early endosome antigen [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 838030, updated on 18-Sep-2024

    Summary

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    Official Full Name
    early endosome antigen
    Primary source
    TAIR:AT1G14680
    Locus tag
    AT1G14680
    See related
    Araport:AT1G14680
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F10B6.4; F10B6_4
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    1
    Sequence:
    Chromosome: 1; NC_003070.9 (5040754..5041967)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Na+/H+ exchanger 8 Neighboring gene ncRNA Neighboring gene Endomembrane protein 70 protein family Neighboring gene basic pentacysteine 2 Neighboring gene ENTH/ANTH/VHS superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    early endosome antigen
    NP_172920.1
    • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G09060.1); Has 8132 Blast hits to 6366 proteins in 685 species: Archae - 171; Bacteria - 671; Metazoa - 4046; Fungi - 445; Plants - 318; Viruses - 23; Other Eukaryotes - 2458 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      5040754..5041967
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_101335.2 → NP_172920.1  early endosome antigen [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_172920.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W9M0, A0A7G2DTR0, Q9LE70
      Conserved Domains (1) summary
      COG1196
      Location:25 → 245
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    Nucleotide Protein
    Heading Accession and Version

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