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    SAUR28 SAUR-like auxin-responsive protein family [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 821123, updated on 18-Sep-2024

    Summary

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    Official Symbol
    SAUR28
    Official Full Name
    SAUR-like auxin-responsive protein family
    Primary source
    TAIR:AT3G03830
    Locus tag
    AT3G03830
    See related
    Araport:AT3G03830
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F20H23.15; F20H23_15; SMALL AUXIN UP RNA 28
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    Genomic context

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    See SAUR28 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    1
    Sequence:
    Chromosome: 3; NC_003074.8 (979976..980562, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene SAUR-like auxin-responsive protein family Neighboring gene tRNA-Trp

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. SIR1, an upstream component in auxin signaling identified by chemical genetics. Zhao Y, et al. Science, 2003 Aug 22. PMID 12893885
    2. Natural variations of growth thermo-responsiveness determined by SAUR26/27/28 proteins in Arabidopsis thaliana. Wang Z, et al. New Phytol, 2019 Oct. PMID 31127632
    3. Control of root cap formation by MicroRNA-targeted auxin response factors in Arabidopsis. Wang JW, et al. Plant Cell, 2005 Aug. PMID 16006581, Free PMC Article
    4. Characterization of a novel putative zinc finger gene MIF1: involvement in multiple hormonal regulation of Arabidopsis development. Hu W, et al. Plant J, 2006 Feb. PMID 16412086
    5. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. The expression of SAUR26/27/28 is modulated by temperature and PIF4.
      Title: Natural variations of growth thermo-responsiveness determined by SAUR26/27/28 proteins in Arabidopsis thaliana.
    Submit: New GeneRIF Correction

    General gene information

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    NM_111254.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in positive regulation of cell growth ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    involved_in regulation of auxin polar transport ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    involved_in response to absence of light IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in response to auxin IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    SAUR-like auxin-responsive protein family
    NP_187033.1
    • SAUR-like auxin-responsive protein family; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT3G03850.1); Has 952 Blast hits to 946 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 951; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      979976..980562 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_111254.3 → NP_187033.1  SAUR-like auxin-responsive protein family [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_187033.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SRW0
      UniProtKB/TrEMBL
      A0A5S9X975, A0A654FED0
      Conserved Domains (1) summary
      cl23790
      Location:17 → 92
      Auxin_inducible; Auxin responsive protein
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SRW0.1

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