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    BRISC complex subunit Abro1-like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 820025, updated on 18-Sep-2024

    Summary

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    Official Full Name
    BRISC complex subunit Abro1-like protein
    Primary source
    TAIR:AT3G08780
    Locus tag
    AT3G08780
    See related
    Araport:AT3G08780
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    2
    Sequence:
    Chromosome: 3; NC_003074.8 (2666063..2667560, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Protein kinase superfamily protein Neighboring gene lipid transfer protein 6 Neighboring gene ENTH/VHS/GAT family protein Neighboring gene ARM repeat superfamily protein Neighboring gene Galactose oxidase/kelch repeat superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A Pan-plant Protein Complex Map Reveals Deep Conservation and Novel Assemblies. McWhite CD, et al. Cell, 2020 Apr 16. PMID 32191846, Free PMC Article
    2. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    3. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001035584.2
    NM_111712.6

    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    BRISC complex subunit Abro1-like protein
    NP_001030661.1
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, cultured cell; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_187490.2
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, cultured cell; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; Has 129 Blast hits to 129 proteins in 38 species: Archae - 0; Bacteria - 0; Metazoa - 96; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      2666063..2667560 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_111712.6 → NP_187490.2  BRISC complex subunit Abro1-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_187490.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V7J1, A0A384KVQ1, Q8RY09
      Conserved Domains (1) summary
      TIGR04236
      Location:107 → 170
      seadorna_VP2; seadornavirus VP2 protein

    2. NM_001035584.2 → NP_001030661.1  BRISC complex subunit Abro1-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001030661.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q2V3X5, Q9C9Y2
      Conserved Domains (1) summary
      TIGR04236
      Location:107 → 170
      seadorna_VP2; seadornavirus VP2 protein
    Nucleotide Protein
    Heading Accession and Version

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