U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Major facilitator superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 821721, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Full Name
    Major facilitator superfamily protein
    Primary source
    TAIR:AT3G21670
    Locus tag
    AT3G21670
    See related
    Araport:AT3G21670
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtNPF6.4; MIL23.23; NPF6.4; NRT1/ PTR family 6.4
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: 3
    Exon count:
    4
    Sequence:
    Chromosome: 3; NC_003074.8 (7626757..7629205, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Protein phosphatase 2A regulatory B subunit family protein Neighboring gene UBX domain-containing protein Neighboring gene uncharacterized protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
    2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    NM_113062.3

    Gene Ontology Provided by TAIR

    Process Evidence Code Pubs
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytosol HDA PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    Major facilitator superfamily protein
    NP_188804.1
    • Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G26690.1); Has 7861 Blast hits to 7524 proteins in 1448 species: Archae - 0; Bacteria - 4058; Metazoa - 633; Fungi - 459; Plants - 2170; Viruses - 0; Other Eukaryotes - 541 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      7626757..7629205 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_113062.3 → NP_188804.1  Major facilitator superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_188804.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8LG02, Q9LVE0, Q9ZPE3
      UniProtKB/TrEMBL
      A0A178VEP2, A0A5S9XED8, A0A654FAP0
      Conserved Domains (1) summary
      cd17413
      Location:33 → 554
      MFS_NPF6; NRT1/PTR family (NPF), subfamily 6 of the Major Facilitator Superfamily of transporters
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LVE0.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools