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    heat-inducible transcription repressor (DUF639) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 821364, updated on 18-Sep-2024

    Summary

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    Official Full Name
    heat-inducible transcription repressor (DUF639)
    Primary source
    TAIR:AT3G18350
    Locus tag
    AT3G18350
    See related
    Araport:AT3G18350
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    10
    Sequence:
    Chromosome: 3; NC_003074.8 (6296677..6300673)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene F-box and associated interaction domains-containing protein Neighboring gene ncRNA Neighboring gene VQ motif-containing protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene C2 domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    NM_112720.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    heat-inducible transcription repressor (DUF639)
    NP_566606.1
    • Plant protein of unknown function (DUF639); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF639 (InterPro:IPR006927); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF639) (TAIR:AT1G48840.1); Has 149 Blast hits to 146 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 149; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      6296677..6300673
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001338335.1 → NP_001325778.1  heat-inducible transcription repressor (DUF639) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VJF7, A0A384K8Q6, A0A5S9XDN7, Q9LS55
      Conserved Domains (1) summary
      pfam04842
      Location:458 → 684
      DUF639; Plant protein of unknown function (DUF639)

    2. NM_001338336.1 → NP_001325777.1  heat-inducible transcription repressor (DUF639) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VJF7, A0A384K8Q6, A0A5S9XDN7, Q9LS55
      Conserved Domains (1) summary
      pfam04842
      Location:458 → 684
      DUF639; Plant protein of unknown function (DUF639)

    3. NM_112720.2 → NP_566606.1  heat-inducible transcription repressor (DUF639) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_566606.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VJF7, A0A384K8Q6, A0A5S9XDN7, Q9LS55
      Conserved Domains (1) summary
      pfam04842
      Location:458 → 684
      DUF639; Plant protein of unknown function (DUF639)
    Nucleotide Protein
    Heading Accession and Version

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