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    COP1-interacting protein-like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 814711, updated on 18-Sep-2024

    Summary

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    Official Full Name
    COP1-interacting protein-like protein
    Primary source
    TAIR:AT2G01800
    Locus tag
    AT2G01800
    See related
    Araport:AT2G01800
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T8O11.3; T8O11_3
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    7
    Sequence:
    Chromosome: 2; NC_003071.7 (343562..345254, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene TRAF-like family protein Neighboring gene RING/FYVE/PHD zinc finger superfamily protein Neighboring gene PLATZ transcription factor family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001124778.1
    NM_001124779.1
    NM_126241.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    COP1-interacting protein-like protein
    NP_001118250.1
    • COP1-interacting protein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: COP1-interacting protein-related (TAIR:AT4G00580.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    NP_001118251.1
    • COP1-interacting protein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: COP1-interacting protein-related (TAIR:AT4G00580.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    NP_178289.1
    • COP1-interacting protein-related; BEST Arabidopsis thaliana protein match is: COP1-interacting protein-related (TAIR:AT4G00580.1); Has 777 Blast hits to 692 proteins in 155 species: Archae - 4; Bacteria - 61; Metazoa - 249; Fungi - 76; Plants - 111; Viruses - 5; Other Eukaryotes - 271 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      343562..345254 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001124778.1 → NP_001118250.1  COP1-interacting protein-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001118250.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      B3H6U0

    2. NM_001124779.1 → NP_001118251.1  COP1-interacting protein-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001118251.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      B3H4H7

    3. NM_126241.1 → NP_178289.1  COP1-interacting protein-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_178289.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9WWE1, Q9ZUA8
    Nucleotide Protein
    Heading Accession and Version

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