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    GTE8 global transcription factor group E8 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 822345, updated on 18-Sep-2024

    Summary

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    Official Symbol
    GTE8
    Official Full Name
    global transcription factor group E8
    Primary source
    TAIR:AT3G27260
    Locus tag
    AT3G27260
    See related
    Araport:AT3G27260
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    GLOBAL TRANSCRIPTION FACTOR GROUP E; global transcription factor group E8
    Summary
    Kinase like protein with similarity to yeast BDF1 and human RING3 protein, which have two bromodomains GTE8 has a single bromodomain
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    Genomic context

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    See GTE8 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    11
    Sequence:
    Chromosome: 3; NC_003074.8 (10067529..10072760)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein Neighboring gene prohibitin 4 Neighboring gene miscRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. Zybailov B, et al. PLoS One, 2008 Apr 23. PMID 18431481, Free PMC Article
    2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001203056.2
    NM_001338863.1
    NM_001338864.1
    NM_113640.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast HDA PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    global transcription factor group E8
    NP_001189985.1
    • global transcription factor group E8 (GTE8); FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: bromodomain and extraterminal domain protein 9 (TAIR:AT5G14270.1).
    NP_189362.1
    • global transcription factor group E8 (GTE8); FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: bromodomain and extraterminal domain protein 9 (TAIR:AT5G14270.1); Has 14889 Blast hits to 11609 proteins in 999 species: Archae - 15; Bacteria - 2194; Metazoa - 6003; Fungi - 1991; Plants - 973; Viruses - 60; Other Eukaryotes - 3653 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      10067529..10072760
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001203056.2 → NP_001189985.1  global transcription factor group E8 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001189985.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654FB44, F4JEZ0
      Conserved Domains (2) summary
      cd05506
      Location:127 → 225
      Bromo_plant1; Bromodomain, uncharacterized subfamily specific to plants. Might function as a global transcription factor. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with ...
      pfam17035
      Location:281 → 348
      BET; Bromodomain extra-terminal - transcription regulation

    2. NM_001338864.1 → NP_001327404.1  global transcription factor group E8 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LS78, A0A654FB44

    3. NM_001338863.1 → NP_001327403.1  global transcription factor group E8 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LS77, A0A654FB44

    4. NM_113640.2 → NP_189362.1  global transcription factor group E8 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_189362.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8W4J0, Q9LK27
      UniProtKB/TrEMBL
      A0A5S9XG79, A0A654FB44
      Conserved Domains (2) summary
      cd05506
      Location:176 → 274
      Bromo_plant1; Bromodomain, uncharacterized subfamily specific to plants. Might function as a global transcription factor. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with ...
      pfam17035
      Location:330 → 393
      BET; Bromodomain extra-terminal - transcription regulation
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LK27.2

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