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    Nucleotide-sugar transporter family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 840299, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Nucleotide-sugar transporter family protein
    Primary source
    TAIR:AT1G34020
    Locus tag
    AT1G34020
    See related
    Araport:AT1G34020
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F12G12.16; F12G12_16; UDP-Rha/UDP-Gal transporter 6; URGT6
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    7
    Sequence:
    Chromosome: 1; NC_003070.9 (12366810..12370014)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene S-locus glycoprotein family protein Neighboring gene Ribosomal protein S13/S18 family Neighboring gene Pyridoxal phosphate (PLP)-dependent transferases superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification of Two Arabidopsis thaliana Plasma Membrane Transporters Able to Transport Glucose 1-Phosphate. Malinova I, et al. Plant Cell Physiol, 2020 Feb 1. PMID 31722406
    2. The Golgi localized bifunctional UDP-rhamnose/UDP-galactose transporter family of Arabidopsis. Rautengarten C, et al. Proc Natl Acad Sci U S A, 2014 Aug 5. PMID 25053812, Free PMC Article
    3. Large-scale analysis of in vivo phosphorylated membrane proteins by immobilized metal ion affinity chromatography and mass spectrometry. Nühse TS, et al. Mol Cell Proteomics, 2003 Nov. PMID 14506206
    4. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_103124.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables D-glucose transmembrane transporter activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables antiporter activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables transmembrane transporter activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within D-glucose transmembrane transport IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane HDA PubMed 
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Nucleotide-sugar transporter family protein
    NP_564433.1
    • Nucleotide-sugar transporter family protein; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: Nucleotide-sugar transporter family protein (TAIR:AT4G09810.1); Has 1634 Blast hits to 1631 proteins in 184 species: Archae - 0; Bacteria - 8; Metazoa - 360; Fungi - 216; Plants - 891; Viruses - 0; Other Eukaryotes - 159 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      12366810..12370014
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001333079.1 → NP_001321552.1  Nucleotide-sugar transporter family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8L9B4, Q9FDZ5
      UniProtKB/TrEMBL
      A0A178W3K3, A0A5S9WIN3, A0A7G2DZZ3
      Conserved Domains (1) summary
      cl26744
      Location:23 → 298
      TPT; Triose-phosphate Transporter family

    2. NM_001333080.1 → NP_001321551.1  Nucleotide-sugar transporter family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8L9B4, Q9FDZ5
      UniProtKB/TrEMBL
      A0A178W3K3, A0A5S9WIN3, A0A7G2DZZ3
      Conserved Domains (1) summary
      cl26744
      Location:23 → 298
      TPT; Triose-phosphate Transporter family

    3. NM_103124.4 → NP_564433.1  Nucleotide-sugar transporter family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_564433.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8L9B4, Q9FDZ5
      UniProtKB/TrEMBL
      A0A178W3K3, A0A5S9WIN3, A0A7G2DZZ3
      Conserved Domains (1) summary
      cl26744
      Location:23 → 298
      TPT; Triose-phosphate Transporter family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9FDZ5.1

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