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    Glutathione S-transferase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 827734, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Glutathione S-transferase family protein
    Primary source
    TAIR:AT4G19880
    Locus tag
    AT4G19880
    See related
    Araport:AT4G19880
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T16H5.240; T16H5_240
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    6
    Sequence:
    Chromosome: 4; NC_003075.7 (10784347..10786556, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Galactose oxidase/kelch repeat superfamily protein Neighboring gene Galactose oxidase/kelch repeat superfamily protein Neighboring gene Pentatricopeptide repeat (PPR-like) superfamily protein Neighboring gene alpha 1,4-glycosyltransferase family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Integrative Analysis from the Epigenome to Translatome Uncovers Patterns of Dominant Nuclear Regulation during Transient Stress. Lee TA, et al. Plant Cell, 2019 Nov. PMID 31519798, Free PMC Article
    2. A proteomic strategy for global analysis of plant protein complexes. Aryal UK, et al. Plant Cell, 2014 Oct. PMID 25293756, Free PMC Article
    3. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
    4. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001036594.1
    NM_001036595.2
    NM_118108.8

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables glutathione transferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within cellular response to hypoxia HEP PubMed 
    Component Evidence Code Pubs
    located_in chloroplast HDA PubMed 
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in cytosol HDA PubMed 

    General protein information

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    Preferred Names
    Glutathione S-transferase family protein
    NP_001031671.1
    • Glutathione S-transferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutathione S-transferase, predicted (InterPro:IPR016639), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutathione S-transferase family protein (TAIR:AT5G45020.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_001031672.1
    • Glutathione S-transferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutathione S-transferase, predicted (InterPro:IPR016639), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutathione S-transferase family protein (TAIR:AT5G45020.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_193723.3
    • Glutathione S-transferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutathione S-transferase, predicted (InterPro:IPR016639), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutathione S-transferase family protein (TAIR:AT5G45020.2); Has 2453 Blast hits to 2453 proteins in 809 species: Archae - 30; Bacteria - 1521; Metazoa - 25; Fungi - 239; Plants - 128; Viruses - 0; Other Eukaryotes - 510 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      10784347..10786556 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_118108.8 → NP_193723.3  Glutathione S-transferase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_193723.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654FR14, Q8H121
      Conserved Domains (1) summary
      COG0435
      Location:35 → 355
      ECM4; Glutathionyl-hydroquinone reductase [Energy production and conversion]

    2. NM_001036595.2 → NP_001031672.1  Glutathione S-transferase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001031672.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4JU04
      Conserved Domains (2) summary
      pfam13409
      Location:83 → 185
      GST_N_2; Glutathione S-transferase, N-terminal domain
      cl02776
      Location:200 → 280
      GST_C_family; C-terminal, alpha helical domain of the Glutathione S-transferase family

    3. NM_001036594.1 → NP_001031671.1  Glutathione S-transferase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001031671.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XUX5, F4JU03
      Conserved Domains (3) summary
      cd03190
      Location:200 → 367
      GST_C_Omega_like; C-terminal, alpha helical domain of Class Omega-like Glutathione S-transferases
      COG0435
      Location:35 → 381
      ECM4; Glutathionyl-hydroquinone reductase [Energy production and conversion]
      pfam13409
      Location:83 → 185
      GST_N_2; Glutathione S-transferase, N-terminal domain
    Nucleotide Protein
    Heading Accession and Version

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