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    Tyrosine transaminase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 828958, updated on 18-Sep-2024

    Summary

    Official Full Name
    Tyrosine transaminase family protein
    Primary source
    TAIR:AT4G28410
    Locus tag
    AT4G28410
    See related
    Araport:AT4G28410
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F20O9.90; F20O9_90; Root System Architecture 1; RSA1
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    Genomic context

    Location:
    chromosome: 4
    Exon count:
    7
    Sequence:
    Chromosome: 4; NC_003075.7 (14052180..14055040)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Protein phosphatase 2C family protein Neighboring gene uncharacterized protein Neighboring gene Tyrosine transaminase family protein Neighboring gene Reticulon family protein

    General gene information

    NM_001341918.1
    NM_118983.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables pyridoxal phosphate binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables transaminase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in amino acid metabolic process IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
     

    General protein information

    Preferred Names
    Tyrosine transaminase family protein
    NP_194570.2
    • Tyrosine transaminase family protein; FUNCTIONS IN: 1-aminocyclopropane-1-carboxylate synthase activity, pyridoxal phosphate binding, transferase activity, transferring nitrogenous groups, transaminase activity, catalytic activity; INVOLVED IN: cellular amino acid and derivative metabolic process, biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Tyrosine transaminase (InterPro:IPR021178), Tyrosine/nicotianamine aminotransferase (InterPro:IPR005958), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: Tyrosine transaminase family protein (TAIR:AT2G20610.1); Has 36818 Blast hits to 36812 proteins in 2952 species: Archae - 883; Bacteria - 26284; Metazoa - 751; Fungi - 692; Plants - 1240; Viruses - 0; Other Eukaryotes - 6968 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      14052180..14055040
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_118983.4NP_194570.2  Tyrosine transaminase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_194570.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V855, A0A5S9XWN1, A0A654FTV3, F4JL94
      Conserved Domains (1) summary
      PLN02187
      Location:4447
      PLN02187; rooty/superroot1
    2. NM_001341918.1NP_001329101.1  Tyrosine transaminase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V855, A0A1P8B6P3, A0A5S9XWN1