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    FUC95A 1,2-alpha-L-fucosidase [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 829575, updated on 18-Sep-2024

    Summary

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    Official Symbol
    FUC95A
    Official Full Name
    1,2-alpha-L-fucosidase
    Primary source
    TAIR:AT4G34260
    Locus tag
    AT4G34260
    See related
    Araport:AT4G34260
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ALTERED XYLOGLUCAN 8; AXY8; F10M10.30; F10M10_30
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    Genomic context

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    See FUC95A in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    9
    Sequence:
    Chromosome: 4; NC_003075.7 (16397995..16402118)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene aldehyde dehydrogenase 3I1 Neighboring gene 3-ketoacyl-CoA synthase 16 Neighboring gene uncharacterized protein Neighboring gene TIP41-like family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. AXY8 encodes an α-fucosidase, underscoring the importance of apoplastic metabolism on the fine structure of Arabidopsis cell wall polysaccharides. Günl M, et al. Plant Cell, 2011 Nov. PMID 22080600, Free PMC Article
    2. Identification of an Arabidopsis gene encoding a GH95 alpha1,2-fucosidase active on xyloglucan oligo- and polysaccharides. Léonard R, et al. Phytochemistry, 2008 Jul. PMID 18495185
    3. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. At4g34260 acts mainly on hemicellulose xyloglucan in the apoplast.
      Title: AXY8 encodes an α-fucosidase, underscoring the importance of apoplastic metabolism on the fine structure of Arabidopsis cell wall polysaccharides.
    2. AtFuc95A gene has a role in xyloglucan metabolism [AtFuc95A gene]
      Title: Identification of an Arabidopsis gene encoding a GH95 alpha1,2-fucosidase active on xyloglucan oligo- and polysaccharides.
    Submit: New GeneRIF Correction

    General gene information

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    NM_119590.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables 1,2-alpha-L-fucosidase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in carbohydrate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in apoplast IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    1,2-alpha-L-fucosidase
    NP_195152.2
    • FUC95A; FUNCTIONS IN: 1,2-alpha-L-fucosidase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase-like (InterPro:IPR008928), Uncharacterised conserved protein UCP007663 (InterPro:IPR016518); Has 1349 Blast hits to 1316 proteins in 300 species: Archae - 2; Bacteria - 1123; Metazoa - 0; Fungi - 116; Plants - 52; Viruses - 0; Other Eukaryotes - 56 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      16397995..16402118
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_119590.4 → NP_195152.2  1,2-alpha-L-fucosidase [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_195152.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8L7W8, Q9SYZ1
      UniProtKB/TrEMBL
      A0A7G2F9V9
      Conserved Domains (1) summary
      pfam14498
      Location:54 → 309
      Glyco_hyd_65N_2; Glycosyl hydrolase family 65, N-terminal domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8L7W8.1

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