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    F-box/FBD/LRR protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 824733, updated on 18-Sep-2024

    Summary

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    Official Full Name
    F-box/FBD/LRR protein
    Primary source
    TAIR:AT3G55670
    Locus tag
    AT3G55670
    See related
    Araport:AT3G55670
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    4
    Sequence:
    Chromosome: 3; NC_003074.8 (20658013..20659503, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene ROP (rho of plants) guanine nucleotide exchange factor 6 Neighboring gene Plant self-incompatibility protein S1 family Neighboring gene ncRNA Neighboring gene Plant self-incompatibility protein S1 family Neighboring gene Plant self-incompatibility protein S1 family

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    F-box/FBD/LRR protein
    NP_191126.1
    • CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596), FBD-like (InterPro:IPR006566); BEST Arabidopsis thaliana protein match is: F-box/RNI-like/FBD-like domains-containing protein (TAIR:AT3G52680.2); Has 400 Blast hits to 249 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 400; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      20658013..20659503 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_115425.1 → NP_191126.1  F-box/FBD/LRR protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_191126.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9M055
      Conserved Domains (1) summary
      pfam08387
      Location:68 → 114
      FBD; FBD
    Nucleotide Protein
    Heading Accession and Version

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