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    28 kDa heat/acid-stable phosphoprotein-like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 834642, updated on 18-Sep-2024

    Summary

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    Official Full Name
    28 kDa heat/acid-stable phosphoprotein-like protein
    Primary source
    TAIR:AT5G46020
    Locus tag
    AT5G46020
    See related
    Araport:AT5G46020
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MCL19.6; MCL19_6
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    8
    Sequence:
    Chromosome: 5; NC_003076.8 (18662805..18664908, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Homeodomain-like superfamily protein Neighboring gene ncRNA Neighboring gene Ras-related small GTP-binding family protein Neighboring gene transcription elongation factor-like protein Neighboring gene Major facilitator superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The putative kinase substrate MUSE7 negatively impacts the accumulation of NLR proteins. Johnson KC, et al. Plant J, 2017 Mar. PMID 28004865
    2. A proteomic strategy for global analysis of plant protein complexes. Aryal UK, et al. Plant Cell, 2014 Oct. PMID 25293756, Free PMC Article
    3. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
    4. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_123970.6

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in cytosol HDA PubMed 
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plastid HDA PubMed 

    General protein information

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    Preferred Names
    28 kDa heat/acid-stable phosphoprotein-like protein
    NP_568653.1
    • CONTAINS InterPro DOMAIN/s: Casein kinase substrate, phosphoprotein PP28 (InterPro:IPR019380); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      18662805..18664908 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_123970.6 → NP_568653.1  28 kDa heat/acid-stable phosphoprotein-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_568653.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UC04, Q9FNM0
      Conserved Domains (1) summary
      pfam10252
      Location:76 → 140
      PP28; Casein kinase substrate phosphoprotein PP28
    Nucleotide Protein
    Heading Accession and Version

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