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    Glucose-methanol-choline (GMC) oxidoreductase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 835268, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Glucose-methanol-choline (GMC) oxidoreductase family protein
    Primary source
    TAIR:AT5G51930
    Locus tag
    AT5G51930
    See related
    Araport:AT5G51930
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MSG15.1; MSG15_1
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    5
    Sequence:
    Chromosome: 5; NC_003076.8 (21101116..21103818)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene TCP family transcription factor Neighboring gene uncharacterized protein Neighboring gene Pyridoxal phosphate (PLP)-dependent transferases superfamily protein Neighboring gene RNA polymerase Rpb6 Neighboring gene Glucose-methanol-choline (GMC) oxidoreductase family protein Neighboring gene complex 1 protein, LYR family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables flavin adenine dinucleotide binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables oxidoreductase activity, acting on CH-OH group of donors IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Glucose-methanol-choline (GMC) oxidoreductase family protein
    NP_200006.1
    • Glucose-methanol-choline (GMC) oxidoreductase family protein; FUNCTIONS IN: aldehyde-lyase activity, oxidoreductase activity, acting on CH-OH group of donors, FAD binding; INVOLVED IN: alcohol metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glucose-methanol-choline oxidoreductase, N-terminal (InterPro:IPR000172), Glucose-methanol-choline oxidoreductase (InterPro:IPR012132), Glucose-methanol-choline oxidoreductase, C-terminal (InterPro:IPR007867); BEST Arabidopsis thaliana protein match is: Glucose-methanol-choline (GMC) oxidoreductase family protein (TAIR:AT3G56060.1); Has 11026 Blast hits to 10629 proteins in 1097 species: Archae - 4; Bacteria - 3996; Metazoa - 809; Fungi - 1552; Plants - 300; Viruses - 18; Other Eukaryotes - 4347 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      21101116..21103818
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001344968.1 → NP_001330130.1  Glucose-methanol-choline (GMC) oxidoreductase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B9V5, A0A654GAB1

    2. NM_124572.1 → NP_200006.1  Glucose-methanol-choline (GMC) oxidoreductase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_200006.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4KEQ5, Q9FJ99
      Conserved Domains (3) summary
      COG2303
      Location:70 → 582
      BetA; Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only]
      pfam05199
      Location:437 → 581
      GMC_oxred_C; GMC oxidoreductase
      cl21454
      Location:73 → 317
      NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
    Nucleotide Protein
    Heading Accession and Version

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