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    mental retardation GTPase activating protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 831460, updated on 18-Sep-2024

    Summary

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    Official Full Name
    mental retardation GTPase activating protein
    Primary source
    TAIR:AT5G16030
    Locus tag
    AT5G16030
    See related
    Araport:AT5G16030
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F1N13.170; F1N13_170
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    5
    Sequence:
    Chromosome: 5; NC_003076.8 (5237970..5240748)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene ROTUNDIFOLIA like 18 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Regulator of chromosome condensation (RCC1) family protein Neighboring gene general regulatory factor 5 Neighboring gene Cytochrome c oxidase biogenesis protein Cmc1-like protein Neighboring gene TCP-1/cpn60 chaperonin family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001036812.2
    NM_001125761.1
    NM_001343432.1
    NM_001343433.1
    NM_121608.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    mental retardation GTPase activating protein
    NP_001031889.1
    • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02500.1); Has 33116 Blast hits to 13831 proteins in 816 species: Archae - 63; Bacteria - 1163; Metazoa - 13507; Fungi - 3213; Plants - 1270; Viruses - 1083; Other Eukaryotes - 12817 (source: NCBI BLink).
    NP_001119233.1
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    NP_568324.1
    • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      5237970..5240748
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_121608.3 → NP_568324.1  mental retardation GTPase activating protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_568324.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UR76, A0A5S9Y6V3, Q8RWE0

    2. NM_001343432.1 → NP_001330659.1  mental retardation GTPase activating protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BBG8

    3. NM_001125761.1 → NP_001119233.1  mental retardation GTPase activating protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001119233.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UR76, B3H6N4

    4. NM_001036812.2 → NP_001031889.1  mental retardation GTPase activating protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001031889.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UR76, Q9LFS1

    5. NM_001343433.1 → NP_001330660.1  mental retardation GTPase activating protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BBH8
    Nucleotide Protein
    Heading Accession and Version

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