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    emb2739 embryo defective 2739 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 827107, updated on 18-Sep-2024

    Summary

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    Official Symbol
    emb2739
    Official Full Name
    embryo defective 2739
    Primary source
    TAIR:AT4G14590
    Locus tag
    AT4G14590
    See related
    Araport:AT4G14590
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    DL3335W; embryo defective 2739; FCAALL.260
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    Genomic context

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    See emb2739 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    2
    Sequence:
    Chromosome: 4; NC_003075.7 (8374391..8376353)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene CBL-interacting protein kinase 4 Neighboring gene ncRNA Neighboring gene Target SNARE coiled-coil domain protein Neighboring gene Mitochondrial transcription termination factor family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_117539.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within embryo development ending in seed dormancy NAS
    Non-traceable Author Statement
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    embryo defective 2739
    NP_193195.1
    • embryo defective 2739 (emb2739); CONTAINS InterPro DOMAIN/s: Integrator complex, subunit 3 (InterPro:IPR019333); Has 179 Blast hits to 170 proteins in 63 species: Archae - 0; Bacteria - 0; Metazoa - 131; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      8374391..8376353
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_117539.2 → NP_193195.1  embryo defective 2739 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_193195.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654FP80, O23315
      Conserved Domains (1) summary
      pfam10189
      Location:224 → 440
      DUF2356; Conserved protein (DUF2356)
    Nucleotide Protein
    Heading Accession and Version

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