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    rpoA RNA polymerase alpha subunit [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 844727, updated on 18-Sep-2024

    Summary

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    Gene symbol
    rpoA
    Gene description
    RNA polymerase alpha subunit
    Locus tag
    ArthCp055
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    See rpoA in Genome Data Viewer
    Sequence:
    NC_000932.1 (77901..78890, complement)

    NC_000932.1Genomic Context describing neighboring genes Neighboring gene cytochrome b6 Neighboring gene cytochrome b6/f complex subunit IV Neighboring gene ribosomal protein S11 Neighboring gene ribosomal protein L36

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000932.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A nuclear-encoded protein, mTERF6, mediates transcription termination of rpoA polycistron for plastid-encoded RNA polymerase-dependent chloroplast gene expression and chloroplast development. Zhang Y, et al. Sci Rep, 2018 Aug 9. PMID 30093718, Free PMC Article
    2. Eukaryotic-type plastid nucleoid protein pTAC3 is essential for transcription by the bacterial-type plastid RNA polymerase. Yagi Y, et al. Proc Natl Acad Sci U S A, 2012 May 8. PMID 22529394, Free PMC Article
    3. Functional analysis of the Arabidopsis thaliana CHLOROPLAST BIOGENESIS 19 pentatricopeptide repeat editing protein. Ramos-Vega M, et al. New Phytol, 2015 Oct. PMID 25980341
    4. Complete structure of the chloroplast genome of Arabidopsis thaliana. Sato S, et al. DNA Res, 1999 Oct 29. PMID 10574454
    5. Advanced proteomic analyses yield a deep catalog of ubiquitylation targets in Arabidopsis. Kim DY, et al. Plant Cell, 2013 May. PMID 23667124, Free PMC Article

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Data suggest mitochondrial transcription termination factor (mTERF6) is more likely a factor required for transcription termination of RNA polymerase alpha subunit (rpoA) polycistron, which is essential for chloroplast gene expression and chloroplast development.
      Title: A nuclear-encoded protein, mTERF6, mediates transcription termination of rpoA polycistron for plastid-encoded RNA polymerase-dependent chloroplast gene expression and chloroplast development.
    2. Study illustrates dynamics of PEP alpha-subunit (RNA polymerase alpha-subunit) and its associated protein plastid transcriptionally active chromosome 3 (pTAC3, At3g04260) during light-dependent transcription in chloroplasts.
      Title: Eukaryotic-type plastid nucleoid protein pTAC3 is essential for transcription by the bacterial-type plastid RNA polymerase.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General protein information

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    Preferred Names
    RNA polymerase alpha subunit

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000932.1 Reference assembly

      Range
      77901..78890 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_051090.1 RNA polymerase alpha subunit (chloroplast) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_051090.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P56762
      UniProtKB/TrEMBL
      A0A1B1W4Y1
      Conserved Domains (1) summary
      CHL00013
      Location:9 → 329
      rpoA; RNA polymerase alpha subunit
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P56762.1

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