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    ssb single-stranded DNA-binding protein [ Pseudomonas aeruginosa PAO1 ]

    Gene ID: 881822, updated on 24-Aug-2024

    Summary

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    Gene symbol
    ssb
    Gene description
    single-stranded DNA-binding protein
    Locus tag
    PA4232
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Pseudomonas aeruginosa PAO1 (strain: PAO1)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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    Genomic context

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    Sequence:
    NC_002516.2 (4746640..4747137, complement)

    NC_002516.2Genomic Context describing neighboring genes Neighboring gene 2,3-dihydroxybenzoate-AMP ligase Neighboring gene pyochelin biosynthetic protein PchC Neighboring gene isochorismate-pyruvate lyase Neighboring gene salicylate biosynthesis isochorismate synthase Neighboring gene major facilitator superfamily transporter Neighboring gene excinuclease ABC subunit A

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_002516.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A Complexed Crystal Structure of a Single-Stranded DNA-Binding Protein with Quercetin and the Structural Basis of Flavonol Inhibition Specificity. Lin ES, et al. Int J Mol Sci, 2022 Jan 6. PMID 35054774, Free PMC Article
    2. Characterization of a single-stranded DNA-binding protein from Pseudomonas aeruginosa PAO1. Jan HC, et al. Protein J, 2011 Jan. PMID 21132356
    3. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
    4. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article
    5. Cystic fibrosis sputum supports growth and cues key aspects of Pseudomonas aeruginosa physiology. Palmer KL, et al. J Bacteriol, 2005 Aug. PMID 16030221, Free PMC Article

    See all (12) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. A Complexed Crystal Structure of a Single-Stranded DNA-Binding Protein with Quercetin and the Structural Basis of Flavonol Inhibition Specificity.
      Title: A Complexed Crystal Structure of a Single-Stranded DNA-Binding Protein with Quercetin and the Structural Basis of Flavonol Inhibition Specificity.
    2. Using EMSA, we characterized the stoichiometry of PaSSB complexed with a series of ssDNA homopolymers, and the size of the binding site was determined to be 29 +/- 1 nt.
      Title: Characterization of a single-stranded DNA-binding protein from Pseudomonas aeruginosa PAO1.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    General protein information

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    Preferred Names
    single-stranded DNA-binding protein
    NP_252922.1
    • Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_002516.2 Reference assembly

      Range
      4746640..4747137 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_252922.1 single-stranded DNA-binding protein [Pseudomonas aeruginosa PAO1]

      See identical proteins and their annotated locations for NP_252922.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      P40947
      Conserved Domains (1) summary
      cl09930
      Location:1 → 165
      RPA_2b-aaRSs_OBF_like; Replication protein A, class 2b aminoacyl-tRNA synthetases, and related proteins with oligonucleotide/oligosaccharide (OB) fold.
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P40947.3

    Gene LinkOut

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