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    selD selenide, water dikinase [ Pseudomonas aeruginosa PAO1 ]

    Gene ID: 877775, updated on 11-Sep-2024

    Summary

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    Gene symbol
    selD
    Gene description
    selenide, water dikinase
    Locus tag
    PA1642
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Pseudomonas aeruginosa PAO1 (strain: PAO1)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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    Genomic context

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    Sequence:
    NC_002516.2 (1787250..1788284)

    NC_002516.2Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene tRNA 2-selenouridine synthase Neighboring gene aldehyde-activating protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_002516.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Structural insights into the catalytic mechanism of Escherichia coli selenophosphate synthetase. Noinaj N, et al. J Bacteriol, 2012 Jan. PMID 22081394, Free PMC Article
    2. Selenoprotein synthesis in E. coli. Purification and characterisation of the enzyme catalysing selenium activation. Ehrenreich A, et al. Eur J Biochem, 1992 Jun 15. PMID 1606960
    3. In vitro synthesis of selenocysteinyl-tRNA(UCA) from seryl-tRNA(UCA): involvement and characterization of the selD gene product. Leinfelder W, et al. Proc Natl Acad Sci U S A, 1990 Jan. PMID 2405383, Free PMC Article
    4. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
    5. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article

    See all (13) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by PseudoCAP

    Function Evidence Code Pubs
    enables magnesium ion binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    enables selenide, water dikinase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within selenocysteine biosynthetic process ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    acts_upstream_of_or_within tRNA seleno-modification ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    selenide, water dikinase
    NP_250333.1
    • Product name confidence: class 2 (High similarity to functionally studied protein)

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_002516.2 Reference assembly

      Range
      1787250..1788284
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_250333.1 selenide, water dikinase [Pseudomonas aeruginosa PAO1]

      See identical proteins and their annotated locations for NP_250333.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q9I383
      Conserved Domains (1) summary
      PRK00943
      Location:1 → 343
      PRK00943; selenide, water dikinase SelD
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9I383.1

    Gene LinkOut

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