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    pmpR [ Pseudomonas aeruginosa PAO1 ]

    Gene ID: 882153, updated on 11-Sep-2024

    Summary

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    Official Symbol
    pmpR
    Primary source
    PseudoCap:PA0964
    Locus tag
    PA0964
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Pseudomonas aeruginosa PAO1 (strain: PAO1)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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    Genomic context

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    Sequence:
    NC_002516.2 (1050301..1051047)

    NC_002516.2Genomic Context describing neighboring genes Neighboring gene DNA-binding stress protein Neighboring gene aspartate--tRNA ligase Neighboring gene crossover junction endodeoxyribonuclease RuvC Neighboring gene Holliday junction ATP-dependent DNA helicase RuvA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_002516.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Crystallization and preliminary crystal structure analysis of the ligand-binding domain of PqsR (MvfR), the Pseudomonas quinolone signal (PQS) responsive quorum-sensing transcription factor of Pseudomonas aeruginosa. Xu N, et al. Acta Crystallogr Sect F Struct Biol Cryst Commun, 2012 Sep 1. PMID 22949189, Free PMC Article
    2. The YebC family protein PA0964 negatively regulates the Pseudomonas aeruginosa quinolone signal system and pyocyanin production. Liang H, et al. J Bacteriol, 2008 Sep. PMID 18641136, Free PMC Article
    3. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
    4. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article
    5. Cystic fibrosis sputum supports growth and cues key aspects of Pseudomonas aeruginosa physiology. Palmer KL, et al. J Bacteriol, 2005 Aug. PMID 16030221, Free PMC Article

    See all (12) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. describe a hexagonal crystal form that is adopted by both the unlabelled and seleno-l-methionine-labelled ligand-binding domain of PqsR (residues 91-319) and that diffracts to 3.25 A degrees resolution
      Title: Crystallization and preliminary crystal structure analysis of the ligand-binding domain of PqsR (MvfR), the Pseudomonas quinolone signal (PQS) responsive quorum-sensing transcription factor of Pseudomonas aeruginosa.
    2. The gene PA0964, designated pmpR (pqsR-mediated PQS regulator), has been identified as a novel regulator of the quinolone signal system.
      Title: The YebC family protein PA0964 negatively regulates the Pseudomonas aeruginosa quinolone signal system and pyocyanin production.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    General protein information

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    Preferred Names
    transcriptional regulator PmpR
    NP_249655.1
    • 'Product name confidence: class 4:Homologs of previously reported genes of unknown function, or no similarity to any previously reported sequences.'

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_002516.2 Reference assembly

      Range
      1050301..1051047
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_249655.1 transcriptional regulator PmpR [Pseudomonas aeruginosa PAO1]

      See identical proteins and their annotated locations for NP_249655.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q51423
      Conserved Domains (1) summary
      PRK00110
      Location:1 → 247
      PRK00110; YebC/PmpR family DNA-binding transcriptional regulator
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q51423.2

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