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    paramyosin-like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 829391, updated on 18-Sep-2024

    Summary

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    Official Full Name
    paramyosin-like protein
    Primary source
    TAIR:AT4G32560
    Locus tag
    AT4G32560
    See related
    Araport:AT4G32560
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    L23H3.40; L23H3_40
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    11
    Sequence:
    Chromosome: 4; NC_003075.7 (15713736..15716659)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Flavin-binding monooxygenase family protein Neighboring gene transcriptional corepressor LEUNIG Neighboring gene TIFY domain protein 8 Neighboring gene Thioredoxin superfamily protein Neighboring gene 2Fe-2S ferredoxin-like superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. CCDC22 and CCDC93, two potential retriever-interacting proteins, are required for root and root hair growth in Arabidopsis. Lewis CD, et al. Front Plant Sci, 2022. PMID 36618652, Free PMC Article
    2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001036694.2
    NM_001342157.1
    NM_119408.2
    NM_202933.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    paramyosin-like protein
    NP_001031771.1
    • paramyosin-related; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_567897.1
    • paramyosin-related; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    NP_974662.1
    • paramyosin-related; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      15713736..15716659
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001036694.2 → NP_001031771.1  paramyosin-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001031771.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V0X6, C0Z2H2

    2. NM_202933.3 → NP_974662.1  paramyosin-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_974662.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V0X6, A0A654FVA3, Q94CB2
      Conserved Domains (1) summary
      TIGR02168
      Location:20 → 306
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type

    3. NM_119408.2 → NP_567897.1  paramyosin-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_567897.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V0X6, A0A654FVA3, Q94CB2
      Conserved Domains (1) summary
      TIGR02168
      Location:20 → 306
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type

    4. NM_001342157.1 → NP_001328038.1  paramyosin-like protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V0X6, A0A1P8B3F9
    Nucleotide Protein
    Heading Accession and Version

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