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    hypothetical protein (DUF241) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 816213, updated on 18-Sep-2024

    Summary

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    Official Full Name
    hypothetical protein (DUF241)
    Primary source
    TAIR:AT2G17080
    Locus tag
    AT2G17080
    See related
    Araport:AT2G17080
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F6P23.10; F6P23_10
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    1
    Sequence:
    Chromosome: 2; NC_003071.7 (7433183..7434172, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene miscRNA Neighboring gene hypothetical protein (DUF241) Neighboring gene kinase with tetratricopeptide repeat domain-containing protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_127263.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in root development IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in shoot system development IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    hypothetical protein (DUF241)
    NP_179300.1
    • Arabidopsis protein of unknown function (DUF241); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF241, plant (InterPro:IPR004320); BEST Arabidopsis thaliana protein match is: Arabidopsis protein of unknown function (DUF241) (TAIR:AT2G17070.1); Has 750 Blast hits to 734 proteins in 87 species: Archae - 2; Bacteria - 37; Metazoa - 79; Fungi - 28; Plants - 534; Viruses - 2; Other Eukaryotes - 68 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      7433183..7434172 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_127263.2 → NP_179300.1  hypothetical protein (DUF241) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_179300.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VSW3, A0MEM1, Q1PF57
      Conserved Domains (1) summary
      pfam03087
      Location:47 → 260
      DUF241; Arabidopsis protein of unknown function
    Nucleotide Protein
    Heading Accession and Version

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